RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 NEDD9Q14511 834 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 CYFIP1Q7L576 1253 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 C1QTNF1Q9BXJ1 281 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 LCTP09848 1927 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
NEO1-211ENST00000560808 STAM2O75886 525 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 GNAT1P11488 350 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 ICAM3P32942 547 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 PLEKHG4Q58EX7 1191 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
NEO1-211ENST00000560808 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 MYOCDQ8IZQ8 938 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 SMARCC2Q8TAQ2 1214 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 SEPT8Q92599 483 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 CUL5Q93034 780 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 RRP36Q96EU6 259 aaKnown RBP11.04□□□□□ -0.64
NEO1-211ENST00000560808 INPP4AQ96PE3 977 aaPredicted RBP11.04□□□□□ -0.64
NEO1-211ENST00000560808 GPR20Q99678 358 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
NEO1-211ENST00000560808 MUC3AQ02505 3323 aa11.04□□□□□ -0.64
NEO1-211ENST00000560808 BDP1A6H8Y1 2624 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 SGSM2O43147 1006 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 FIBPO43427 364 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 UPP2O95045 317 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 KIF5BP33176 963 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 SP4Q02446 784 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 CTCFLQ8NI51 663 aaPredicted RBP11.03□□□□□ -0.64
NEO1-211ENST00000560808 MAP4K1Q92918 833 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 MYL10Q9BUA6 226 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 EPHX3Q9H6B9 360 aa11.03□□□□□ -0.64
NEO1-211ENST00000560808 PRRC2BQ5JSZ5 2229 aaKnown RBP11.03□□□□□ -0.64
NEO1-211ENST00000560808 CTSHP09668 335 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 SMARCA1P28370 1054 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 HOXC8P31273 242 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 ANTXR2P58335 489 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 HTRA4P83105 476 aaPredicted RBP11.02□□□□□ -0.65
NEO1-211ENST00000560808 SEMA3FQ13275 785 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
NEO1-211ENST00000560808 PCNX4Q63HM2 1172 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 NLRX1Q86UT6 975 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 ZNF654Q8IZM8 581 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 TOP1MTQ969P6 601 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 YME1L1Q96TA2 773 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 MAP3K14Q99558 947 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 SENP7Q9BQF6 1050 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 SEC63Q9UGP8 760 aaKnown RBP11.02□□□□□ -0.65
NEO1-211ENST00000560808 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
NEO1-211ENST00000560808 TELO2Q9Y4R8 837 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 XIRP2A4UGR9 3374 aa11.02□□□□□ -0.65
NEO1-211ENST00000560808 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 MEIS2O14770 477 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 CAND2O75155 1236 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 GNAQP50148 359 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 ARHGAP4P98171 946 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 CASC1Q6TDU7 716 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 MB21D2Q8IYB1 491 aaPredicted RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 CMTR1Q8N1G2 835 aaKnown RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 SRBD1Q8N5C6 995 aaKnown RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 GIMAP8Q8ND71 665 aaPredicted RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 SPZ1Q9BXG8 430 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 UBE2ZQ9H832 354 aaPredicted RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 LY9Q9HBG7 655 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
NEO1-211ENST00000560808 FRMPD4Q14CM0 1322 aa11.01□□□□□ -0.65
NEO1-211ENST00000560808 TRANK1O15050 2925 aa11□□□□□ -0.65
NEO1-211ENST00000560808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11□□□□□ -0.65
NEO1-211ENST00000560808 CCDC69A6NI79 296 aa11□□□□□ -0.65
NEO1-211ENST00000560808 PRC1O43663 620 aa11□□□□□ -0.65
NEO1-211ENST00000560808 ATP9AO75110 1047 aa11□□□□□ -0.65
NEO1-211ENST00000560808 DDAH1O94760 285 aa11□□□□□ -0.65
NEO1-211ENST00000560808 CHRNA1P02708 482 aa11□□□□□ -0.65
NEO1-211ENST00000560808 KCNA5P22460 613 aa11□□□□□ -0.65
NEO1-211ENST00000560808 ADAM17P78536 824 aa11□□□□□ -0.65
NEO1-211ENST00000560808 GPM6BQ13491 265 aa11□□□□□ -0.65
NEO1-211ENST00000560808 PTPROQ16827 1216 aa11□□□□□ -0.65
NEO1-211ENST00000560808 FAM26DQ5JW98 314 aa11□□□□□ -0.65
NEO1-211ENST00000560808 TMEM192Q8IY95 271 aa11□□□□□ -0.65
NEO1-211ENST00000560808 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
NEO1-211ENST00000560808 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
NEO1-211ENST00000560808 MRPL38Q96DV4 380 aaKnown RBP11□□□□□ -0.65
NEO1-211ENST00000560808 SAMD11Q96NU1 681 aa11□□□□□ -0.65
NEO1-211ENST00000560808 IFIH1Q9BYX4 1025 aaKnown RBP11□□□□□ -0.65
NEO1-211ENST00000560808 SCN5AQ14524 2016 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms