RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 COL4A6Q14031 1691 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 OPLAHO14841 1288 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 GRM6O15303 877 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 NCK2O43639 380 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 UBA1P22314 1058 aaKnown RBP19.36■□□□□ 0.69
HERC1-207ENST00000560316 HOXC8P31273 242 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 GTF2F1P35269 517 aaKnown RBP eCLIP19.36■□□□□ 0.69
HERC1-207ENST00000560316 DGKHQ86XP1 1220 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 FIBCD1Q8N539 461 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 GPKOWQ92917 476 aaPredicted RBP eCLIP19.36■□□□□ 0.69
HERC1-207ENST00000560316 IL17RAQ96F46 866 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 POP1Q99575 1024 aaKnown RBP19.36■□□□□ 0.69
HERC1-207ENST00000560316 PDCD2LQ9BRP1 358 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 RNPEPQ9H4A4 650 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 IGFLR1Q9H665 355 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 JMJD4Q9H9V9 463 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 TECTAO75443 2155 aa19.36■□□□□ 0.69
HERC1-207ENST00000560316 ZMYM6O95789 1325 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 H3BRB1 525 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 LINC00271P0C7V0 271 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 HSD17B4P51659 736 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 IER5LQ5T953 404 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 IL31RAQ8NI17 732 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 ESR2Q92731 530 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 TUT1Q9H6E5 874 aaKnown RBP19.35■□□□□ 0.69
HERC1-207ENST00000560316 BCAS3Q9H6U6 928 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 KAT14Q9H8E8 782 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 RALGAPA2Q2PPJ7 1873 aa19.35■□□□□ 0.69
HERC1-207ENST00000560316 C5orf67F2Z3F1 127 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 STXBP3O00186 592 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 LINC01565O15544 149 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 TBX10O75333 385 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 LGALS2P05162 132 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 PCP11498 1178 aaKnown RBP19.34■□□□□ 0.69
HERC1-207ENST00000560316 BMPR1AP36894 532 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 NMIQ13287 307 aaPredicted RBP19.34■□□□□ 0.69
HERC1-207ENST00000560316 ASPRV1Q53RT3 343 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 KCNV1Q6PIU1 500 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 MLXIPQ9HAP2 919 aa19.34■□□□□ 0.69
HERC1-207ENST00000560316 CAND2O75155 1236 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 RB1P06400 928 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 HOXA13P31271 388 aaPredicted RBP19.33■□□□□ 0.68
HERC1-207ENST00000560316 SMAD4Q13485 552 aaKnown RBP19.33■□□□□ 0.68
HERC1-207ENST00000560316 PGM5Q15124 567 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 VSIG10LQ86VR7 867 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 EDAQ92838 391 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 APBB2Q92870 758 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 C11orf84Q9BUA3 381 aaPredicted RBP19.33■□□□□ 0.68
HERC1-207ENST00000560316 LMAN2LQ9H0V9 348 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 RNF41Q9H4P4 317 aaPredicted RBP19.33■□□□□ 0.68
HERC1-207ENST00000560316 SETD4Q9NVD3 440 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 CD207Q9UJ71 328 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 MYH6P13533 1939 aa19.33■□□□□ 0.68
HERC1-207ENST00000560316 CCDC171Q6TFL3 1326 aa19.32■□□□□ 0.68
HERC1-207ENST00000560316 KDM4AO75164 1064 aa19.32■□□□□ 0.68
HERC1-207ENST00000560316 PARP1P09874 1014 aaKnown RBP19.32■□□□□ 0.68
HERC1-207ENST00000560316 STOX1Q6ZVD7 989 aa19.32■□□□□ 0.68
HERC1-207ENST00000560316 AMNQ9BXJ7 453 aa19.32■□□□□ 0.68
HERC1-207ENST00000560316 USP34Q70CQ2 3546 aa19.32■□□□□ 0.68
HERC1-207ENST00000560316 TMEM221A6NGB7 291 aa19.31■□□□□ 0.68
HERC1-207ENST00000560316 M0R296 226 aa19.31■□□□□ 0.68
HERC1-207ENST00000560316 PPP1R11O60927 126 aaPredicted RBP19.31■□□□□ 0.68
HERC1-207ENST00000560316 TGFB3P10600 412 aa19.31■□□□□ 0.68
HERC1-207ENST00000560316 IQCA1Q86XH1 822 aa19.31■□□□□ 0.68
HERC1-207ENST00000560316 PBXIP1Q96AQ6 731 aa19.31■□□□□ 0.68
HERC1-207ENST00000560316 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
HERC1-207ENST00000560316 ADGRA3Q8IWK6 1321 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 TRIM6-TRIM34B2RNG4 842 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 PTPN5P54829 565 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 GHRHRQ02643 423 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 ADAM15Q13444 863 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 TRIM67Q6ZTA4 783 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 BMP8AQ7Z5Y6 402 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 STAG2Q8N3U4 1231 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 ENAHQ8N8S7 591 aaPredicted RBP19.3■□□□□ 0.68
HERC1-207ENST00000560316 ZSCAN10Q96SZ4 725 aaPredicted RBP19.3■□□□□ 0.68
HERC1-207ENST00000560316 RC3H2Q9HBD1 1191 aaKnown RBP19.3■□□□□ 0.68
HERC1-207ENST00000560316 ALG13Q9NP73 1137 aaKnown RBP19.3■□□□□ 0.68
HERC1-207ENST00000560316 RWDD3Q9Y3V2 267 aa19.3■□□□□ 0.68
HERC1-207ENST00000560316 B4E1Z4 1266 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 NOP56O00567 594 aaKnown RBP19.29■□□□□ 0.68
HERC1-207ENST00000560316 ZNF213O14771 459 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 CHRNA1P02708 482 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 GHRP10912 638 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 CCND2P30279 289 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 NDUFV1P49821 464 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 PDE1AP54750 535 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 TCF15Q12870 199 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 CAMK1Q14012 370 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 CCDC178Q5BJE1 867 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 FAM26DQ5JW98 314 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 ANKRD45Q5TZF3 282 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 CLP1Q92989 425 aaKnown RBP19.29■□□□□ 0.68
HERC1-207ENST00000560316 PCDHA1Q9Y5I3 950 aa19.29■□□□□ 0.68
HERC1-207ENST00000560316 ST18O60284 1047 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 MMP1P03956 469 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 GNAT1P11488 350 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 ARHGAP4P98171 946 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms