RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 PNMA1Q8ND90 353 aa18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 EVI5LQ96CN4 794 aa18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 SPATA33Q96N06 139 aa18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 PDCD2LQ9BRP1 358 aa18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 KCNH6Q9H252 994 aa18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
AC243562.3-201ENST00000559866 MYO7AQ13402 2215 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 SMIM10L2AP0DMW4 78 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 SMIM10L2BP0DMW5 78 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 MYCLP12524 364 aaPredicted RBP18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 IER5LQ5T953 404 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 RNF135Q8IUD6 432 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 ATP6V0A1Q93050 837 aa18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 IFIH1Q9BYX4 1025 aaKnown RBP18.21■□□□□ 0.51
AC243562.3-201ENST00000559866 C17orf102A2RUQ5 167 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 CTNNB1P35222 781 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 HERC4Q5GLZ8 1057 aaPredicted RBP18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 SEPT8Q92599 483 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 RNPEPQ9H4A4 650 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 RC3H2Q9HBD1 1191 aaKnown RBP18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 VAT1LQ9HCJ6 419 aa18.2■□□□□ 0.5
AC243562.3-201ENST00000559866 HOXA13P31271 388 aaPredicted RBP18.19■□□□□ 0.5
AC243562.3-201ENST00000559866 GHRHRQ02643 423 aa18.19■□□□□ 0.5
AC243562.3-201ENST00000559866 PGM5Q15124 567 aa18.19■□□□□ 0.5
AC243562.3-201ENST00000559866 MAF1Q9H063 256 aa18.19■□□□□ 0.5
AC243562.3-201ENST00000559866 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
AC243562.3-201ENST00000559866 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
AC243562.3-201ENST00000559866 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 LGALS2P05162 132 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 DGKHQ86XP1 1220 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 TRIM50Q86XT4 487 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 STAG2Q8N3U4 1231 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 FAM50BQ9Y247 325 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
AC243562.3-201ENST00000559866 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 H3BRB1 525 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 DHX16O60231 1041 aaKnown RBP18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 KDM4AO75164 1064 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 CAMK1Q14012 370 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 STOX1Q6ZVD7 989 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 VSIG10LQ86VR7 867 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 ENAHQ8N8S7 591 aaPredicted RBP18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 ESR2Q92731 530 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 TUT1Q9H6E5 874 aaKnown RBP18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 ALG13Q9NP73 1137 aaKnown RBP18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 SETD4Q9NVD3 440 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 ADGRA3Q8IWK6 1321 aa18.17■□□□□ 0.5
AC243562.3-201ENST00000559866 MYO15AQ9UKN7 3530 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 B4E1Z4 1266 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 DNAJB1P25685 340 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 PDE1AP54750 535 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 SMAD4Q13485 552 aaKnown RBP18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 ASPRV1Q53RT3 343 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 FIBCD1Q8N539 461 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 EDAQ92838 391 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 IL17RAQ96F46 866 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 MFSD14AQ96MC6 490 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 IGFLR1Q9H665 355 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 KAT14Q9H8E8 782 aa18.16■□□□□ 0.5
AC243562.3-201ENST00000559866 STXBP3O00186 592 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 BMPR1AP36894 532 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 ADAM17P78536 824 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 TCF15Q12870 199 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 SEMA3FQ13275 785 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 FAM26DQ5JW98 314 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 ADGRD2Q7Z7M1 963 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 TICAM2Q86XR7 235 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 MSLNLQ96KJ4 702 aa18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
AC243562.3-201ENST00000559866 CFAP54Q96N23 3096 aa18.14■□□□□ 0.5
AC243562.3-201ENST00000559866 CHRNA1P02708 482 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 MMP1P03956 469 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 RUFY4Q6ZNE9 571 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 LMBR1Q8WVP7 490 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 MTMR8Q96EF0 704 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 C11orf84Q9BUA3 381 aaPredicted RBP18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 AMNQ9BXJ7 453 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 MLXIPQ9HAP2 919 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 FAM86C1Q9NVL1 165 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 CLEC1BQ9P126 229 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 CD207Q9UJ71 328 aa18.14■□□□□ 0.49
AC243562.3-201ENST00000559866 TTC3P53804 2025 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 TMEM221A6NGB7 291 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 M0R296 226 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 CAND2O75155 1236 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 GHRP10912 638 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 MGAT3Q09327 533 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms