RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
PCAT29-203ENST00000559212 RTEL1Q9NZ71 1219 aa12.22□□□□□ -0.45
PCAT29-203ENST00000559212 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
PCAT29-203ENST00000559212 BAZ2BQ9UIF8 2168 aaKnown RBP12.21□□□□□ -0.45
PCAT29-203ENST00000559212 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 FIBPO43427 364 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 LPXNO60711 386 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 DDAH1O94760 285 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 KIF5BP33176 963 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 KCNQ1P51787 676 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 METTL7BQ6UX53 244 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 GDPD5Q8WTR4 605 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 TGS1Q96RS0 853 aaKnown RBP12.21□□□□□ -0.45
PCAT29-203ENST00000559212 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 RNPEPQ9H4A4 650 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 LY9Q9HBG7 655 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 LMCD1Q9NZU5 365 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 SEC63Q9UGP8 760 aaKnown RBP12.21□□□□□ -0.45
PCAT29-203ENST00000559212 MTUS1Q9ULD2 1270 aa12.21□□□□□ -0.45
PCAT29-203ENST00000559212 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.46
PCAT29-203ENST00000559212 DOCK5Q9H7D0 1870 aa12.21□□□□□ -0.46
PCAT29-203ENST00000559212 CHD7Q9P2D1 2997 aa12.21□□□□□ -0.46
PCAT29-203ENST00000559212 SIP14410 1827 aa12.21□□□□□ -0.46
PCAT29-203ENST00000559212 LINC01553A4QN01 128 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 TREHO43280 583 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 PRC1O43663 620 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 AMHP03971 560 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 GNAT1P11488 350 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 SMARCA1P28370 1054 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 HOXC8P31273 242 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 GNAQP50148 359 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 ERVK-21P61565 698 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
PCAT29-203ENST00000559212 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 PLEKHG4Q58EX7 1191 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 PCNX4Q63HM2 1172 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 XRRA1Q6P2D8 792 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 USP17L6PQ6QN14 398 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
PCAT29-203ENST00000559212 NFXL1Q6ZNB6 911 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 NLRX1Q86UT6 975 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 HLA-CQ95604 372 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 NECAB3Q96P71 396 aaPredicted RBP12.2□□□□□ -0.46
PCAT29-203ENST00000559212 GPR20Q99678 358 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 MTA3Q9BTC8 594 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 ZNF215Q9UL58 517 aaPredicted RBP12.2□□□□□ -0.46
PCAT29-203ENST00000559212 INSL6Q9Y581 213 aa12.2□□□□□ -0.46
PCAT29-203ENST00000559212 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 CAND2O75155 1236 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 CTSHP09668 335 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 COL9A1P20849 921 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 MCM5P33992 734 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 SP4Q02446 784 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 UTP14CQ5TAP6 766 aaKnown RBP12.19□□□□□ -0.46
PCAT29-203ENST00000559212 MYOCDQ8IZQ8 938 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 SEPT8Q92599 483 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 SENP7Q9BQF6 1050 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 SUGCTQ9HAC7 445 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 SETD4Q9NVD3 440 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 MICAL3Q7RTP6 2002 aa12.19□□□□□ -0.46
PCAT29-203ENST00000559212 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
PCAT29-203ENST00000559212 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
PCAT29-203ENST00000559212 MEIS2O14770 477 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 PLEKHA8P1O95397 391 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 CALM1P0DP23 149 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 CALM2P0DP24 149 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 CALM3P0DP25 149 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 ARHGAP4P98171 946 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 TRIM50Q86XT4 487 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 GIMAP8Q8ND71 665 aaPredicted RBP12.18□□□□□ -0.46
PCAT29-203ENST00000559212 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
PCAT29-203ENST00000559212 RXRAP19793 462 aa12.17□□□□□ -0.46
PCAT29-203ENST00000559212 HTRA4P83105 476 aaPredicted RBP12.17□□□□□ -0.46
PCAT29-203ENST00000559212 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
PCAT29-203ENST00000559212 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
PCAT29-203ENST00000559212 APBB2Q92870 758 aa12.17□□□□□ -0.46
PCAT29-203ENST00000559212 GPRASP2Q96D09 838 aa12.17□□□□□ -0.46
PCAT29-203ENST00000559212 CDHR1Q96JP9 859 aa12.17□□□□□ -0.46
PCAT29-203ENST00000559212 C17orf80Q9BSJ5 609 aa12.17□□□□□ -0.46
PCAT29-203ENST00000559212 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
PCAT29-203ENST00000559212 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
PCAT29-203ENST00000559212 NRCAMQ92823 1304 aa12.16□□□□□ -0.46
PCAT29-203ENST00000559212 SLC27A2O14975 620 aa12.16□□□□□ -0.46
PCAT29-203ENST00000559212 UPP2O95045 317 aa12.16□□□□□ -0.46
PCAT29-203ENST00000559212 TCF7P36402 384 aaPredicted RBP12.16□□□□□ -0.46
PCAT29-203ENST00000559212 LIFRP42702 1097 aa12.16□□□□□ -0.46
PCAT29-203ENST00000559212 ADAM17P78536 824 aa12.16□□□□□ -0.46
PCAT29-203ENST00000559212 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
PCAT29-203ENST00000559212 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
PCAT29-203ENST00000559212 LMBR1Q8WVP7 490 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms