RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 IMPDH2P12268 514 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 NME1P15531 152 aaKnown RBP7.94□□□□□ -1.14
CLPX-202ENST00000558103 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLPX-202ENST00000558103 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
CLPX-202ENST00000558103 HLFQ16534 295 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 ZNF792Q3KQV3 632 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 CRY2Q49AN0 593 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 SLC23A3Q6PIS1 610 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 LDHDQ86WU2 507 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 ASPNQ9BXN1 380 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 TGIF2Q9GZN2 237 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLPX-202ENST00000558103 TAF1DQ9H5J8 278 aaPredicted RBP7.94□□□□□ -1.14
CLPX-202ENST00000558103 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
CLPX-202ENST00000558103 ZNRF3Q9ULT6 936 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 NIP7Q9Y221 180 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLPX-202ENST00000558103 DDX60Q8IY21 1712 aaKnown RBP7.94□□□□□ -1.14
CLPX-202ENST00000558103 FZD9O00144 591 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 SRFP11831 508 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 CCNFP41002 786 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 ZP2Q05996 745 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 RAD51AP2Q09MP3 1159 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 TAF7Q15545 349 aaPredicted RBP7.93□□□□□ -1.14
CLPX-202ENST00000558103 INTS3Q68E01 1043 aaKnown RBP7.93□□□□□ -1.14
CLPX-202ENST00000558103 RASGRP4Q8TDF6 673 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 FERD3LQ96RJ6 166 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 ZNF277Q9NRM2 450 aaPredicted RBP7.93□□□□□ -1.14
CLPX-202ENST00000558103 GINM1Q9NU53 330 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 UBN2Q6ZU65 1347 aa7.93□□□□□ -1.14
CLPX-202ENST00000558103 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 RNASE1P07998 156 aaKnown RBP7.92□□□□□ -1.14
CLPX-202ENST00000558103 ALDH1B1P30837 517 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 POLR2BP30876 1174 aaKnown RBP7.92□□□□□ -1.14
CLPX-202ENST00000558103 IARSP41252 1262 aaKnown RBP7.92□□□□□ -1.14
CLPX-202ENST00000558103 RTKN2Q8IZC4 609 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 GPRASP2Q96D09 838 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 PSMD1Q99460 953 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 GPR62Q9BZJ7 368 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 TRIT1Q9H3H1 467 aaKnown RBP7.92□□□□□ -1.14
CLPX-202ENST00000558103 GPATCH2Q9NW75 528 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 MIS18AQ9NYP9 233 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 ADAMTS6Q9UKP5 1117 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 PPT2Q9UMR5 302 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 RNF123Q5XPI4 1314 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 MAP3K15Q6ZN16 1313 aa7.92□□□□□ -1.14
CLPX-202ENST00000558103 ERVV-1B6SEH8 477 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 EPHX2P34913 555 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 GJA8P48165 433 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 EIF4A1P60842 406 aaKnown RBP7.91□□□□□ -1.14
CLPX-202ENST00000558103 GPC2Q8N158 579 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 RBBP8NLQ8NC74 664 aaPredicted RBP7.91□□□□□ -1.14
CLPX-202ENST00000558103 PLEKHF1Q96S99 279 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 ACBD3Q9H3P7 528 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 HACL1Q9UJ83 578 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 EFR3BQ9Y2G0 817 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 DUOX1Q9NRD9 1551 aa7.91□□□□□ -1.14
CLPX-202ENST00000558103 WASH4PA8MWX3 477 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 FOXN1O15353 648 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 NTSR2O95665 410 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 TPP2P29144 1249 aaPredicted RBP7.9□□□□□ -1.14
CLPX-202ENST00000558103 SOX9P48436 509 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 RNF4P78317 190 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
CLPX-202ENST00000558103 FBXW10Q5XX13 1052 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 TTLL7Q6ZT98 887 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 TMPRSS7Q7RTY8 843 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 LRP10Q7Z4F1 713 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 SYNE4Q8N205 404 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 PNISRQ8TF01 805 aaKnown RBP7.9□□□□□ -1.14
CLPX-202ENST00000558103 SLC9A7Q96T83 725 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 NYXQ9GZU5 481 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 CARS2Q9HA77 564 aaKnown RBP7.9□□□□□ -1.14
CLPX-202ENST00000558103 PRDM7Q9NQW5 492 aa7.9□□□□□ -1.14
CLPX-202ENST00000558103 PSME4Q14997 1843 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 RASSF10A6NK89 507 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 TCF3P15923 654 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 GAB4Q2WGN9 574 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 PNMA8AQ86V59 439 aaPredicted RBP7.89□□□□□ -1.15
CLPX-202ENST00000558103 TSPYL5Q86VY4 417 aaPredicted RBP7.89□□□□□ -1.15
CLPX-202ENST00000558103 TMEM192Q8IY95 271 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 ZNF34Q8IZ26 560 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 TM9SF2Q99805 663 aa7.89□□□□□ -1.15
CLPX-202ENST00000558103 POLR2AP24928 1970 aaKnown RBP7.88□□□□□ -1.15
CLPX-202ENST00000558103 CLEC3AO75596 197 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 ESR1P03372 595 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 ACRP10323 421 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 MYL6BP14649 208 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 ERCC5P28715 1186 aaPredicted RBP7.88□□□□□ -1.15
CLPX-202ENST00000558103 NFE2L2Q16236 605 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 NBPF9Q3BBW0 867 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 SUSD4Q5VX71 490 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 KIF6Q6ZMV9 814 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 CREG2Q8IUH2 290 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 CNTROBQ8N137 903 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 TAB3Q8N5C8 712 aaPredicted RBP7.88□□□□□ -1.15
CLPX-202ENST00000558103 NGEFQ8N5V2 710 aa7.88□□□□□ -1.15
CLPX-202ENST00000558103 LRRN4CLQ8ND94 238 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms