RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GRM4Q14833 912 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 SERINC5Q86VE9 423 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 FBXO22Q8NEZ5 403 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 ATP6V0A1Q93050 837 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 MAF1Q9H063 256 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 RNPEPQ9H4A4 650 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 CTNNA3Q9UI47 895 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 WDR81Q562E7 1941 aa16.33■□□□□ 0.21
SLIRP-210ENST00000557431 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
SLIRP-210ENST00000557431 HIP1O00291 1037 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 PARNO95453 639 aaKnown RBP16.33■□□□□ 0.2
SLIRP-210ENST00000557431 POLR2MP0CAP2 368 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 KCNA5P22460 613 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 MRPS9P82933 396 aaKnown RBP16.33■□□□□ 0.2
SLIRP-210ENST00000557431 MKRN4PQ13434 485 aaPredicted RBP16.33■□□□□ 0.2
SLIRP-210ENST00000557431 UTP14CQ5TAP6 766 aaKnown RBP16.33■□□□□ 0.2
SLIRP-210ENST00000557431 SETD4Q9NVD3 440 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 TTC3P53804 2025 aa16.33■□□□□ 0.2
SLIRP-210ENST00000557431 H3BRB1 525 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 IFIT3O14879 490 aaKnown RBP16.32■□□□□ 0.2
SLIRP-210ENST00000557431 CSPG5O95196 566 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 AMHP03971 560 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 CYP21A2P08686 494 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 CYFIP1Q7L576 1253 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
SLIRP-210ENST00000557431 TUT1Q9H6E5 874 aaKnown RBP16.32■□□□□ 0.2
SLIRP-210ENST00000557431 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
SLIRP-210ENST00000557431 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.31■□□□□ 0.2
SLIRP-210ENST00000557431 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
SLIRP-210ENST00000557431 MYL10Q9BUA6 226 aa16.31■□□□□ 0.2
SLIRP-210ENST00000557431 LMCD1Q9NZU5 365 aa16.31■□□□□ 0.2
SLIRP-210ENST00000557431 INSL6Q9Y581 213 aa16.31■□□□□ 0.2
SLIRP-210ENST00000557431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.3■□□□□ 0.2
SLIRP-210ENST00000557431 H3BQ06 376 aaPredicted RBP16.3■□□□□ 0.2
SLIRP-210ENST00000557431 NOP56O00567 594 aaKnown RBP16.3■□□□□ 0.2
SLIRP-210ENST00000557431 EFCAB14O75071 495 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 HOXC8P31273 242 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 NT5C2P49902 561 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 ANTXR2P58335 489 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 TMEM31Q5JXX7 168 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 EP400NLQ6ZTU2 488 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 COL4A6Q14031 1691 aa16.3■□□□□ 0.2
SLIRP-210ENST00000557431 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 E7EWF7 191 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 TROAPQ12815 778 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 TRDNQ13061 729 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 GPM6BQ13491 265 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 COL9A3Q14050 684 aaPredicted RBP16.29■□□□□ 0.2
SLIRP-210ENST00000557431 WTAPQ15007 396 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 TTC22Q5TAA0 569 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 USP17L6PQ6QN14 398 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
SLIRP-210ENST00000557431 YME1L1Q96TA2 773 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 GPR20Q99678 358 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
SLIRP-210ENST00000557431 PKD2L1Q9P0L9 805 aa16.29■□□□□ 0.2
SLIRP-210ENST00000557431 MYH9P35579 1960 aaKnown RBP16.29■□□□□ 0.2
SLIRP-210ENST00000557431 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 TGFB3P10600 412 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 ARHGAP4P98171 946 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 TCEAL5Q5H9L2 206 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 PTCRAQ6ISU1 281 aaPredicted RBP16.28■□□□□ 0.2
SLIRP-210ENST00000557431 RUFY4Q6ZNE9 571 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 FAM178BQ8IXR5 827 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
SLIRP-210ENST00000557431 LMBR1Q8WVP7 490 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 SEPT8Q92599 483 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 ZBTB10Q96DT7 871 aa16.28■□□□□ 0.2
SLIRP-210ENST00000557431 INPP4AQ96PE3 977 aaPredicted RBP16.28■□□□□ 0.2
SLIRP-210ENST00000557431 FNDC1Q4ZHG4 1894 aaPredicted RBP16.28■□□□□ 0.2
SLIRP-210ENST00000557431 ERICH2A1L162 156 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 SPATA31C2B4DYI2 1134 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 RXRAP19793 462 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
SLIRP-210ENST00000557431 ICAM3P32942 547 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 LEXMQ3ZCV2 418 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
SLIRP-210ENST00000557431 TMEM192Q8IY95 271 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 TOP1MTQ969P6 601 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 MRPL38Q96DV4 380 aaKnown RBP16.27■□□□□ 0.2
SLIRP-210ENST00000557431 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
SLIRP-210ENST00000557431 HCN4Q9Y3Q4 1203 aa16.27■□□□□ 0.2
SLIRP-210ENST00000557431 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 FIBPO43427 364 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 GHRP10912 638 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 CHMLP26374 656 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 MARK3P27448 753 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 GNPTABQ3T906 1256 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 METTL7BQ6UX53 244 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms