RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 USP17L6PQ6QN14 398 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 RAB11FIP4Q86YS3 637 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 CMTR1Q8N1G2 835 aaKnown RBP15.36■□□□□ 0.05
TGFB3-204ENST00000556285 MLXIPQ9HAP2 919 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 LOXHD1Q8IVV2 1947 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 FRMPD4Q14CM0 1322 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 SPATA31C2B4DYI2 1134 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 KIF28PB7ZC32 967 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 PRC1O43663 620 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 PLEKHA8P1O95397 391 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 LGALS2P05162 132 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 TGFB3P10600 412 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 RXRAP19793 462 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 TRAF1Q13077 416 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 FAM117BQ6P1L5 589 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
TGFB3-204ENST00000556285 SERINC5Q86VE9 423 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 SKAP1Q86WV1 359 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 SRBD1Q8N5C6 995 aaKnown RBP15.35■□□□□ 0.05
TGFB3-204ENST00000556285 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
TGFB3-204ENST00000556285 LSG1Q9H089 658 aaKnown RBP15.35■□□□□ 0.05
TGFB3-204ENST00000556285 EPHX3Q9H6B9 360 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 MTUS1Q9ULD2 1270 aa15.35■□□□□ 0.05
TGFB3-204ENST00000556285 KIAA1671Q9BY89 1806 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 hCG_1642624A0A1W2PR95 340 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 H3BRB1 525 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 MEIS2O14770 477 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 ICAM3P32942 547 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 THPOP40225 353 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
TGFB3-204ENST00000556285 CYFIP1Q7L576 1253 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 TRIM50Q86XT4 487 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 ZBED2Q9BTP6 218 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 TUT1Q9H6E5 874 aaKnown RBP15.34■□□□□ 0.05
TGFB3-204ENST00000556285 CD320Q9NPF0 282 aa15.34■□□□□ 0.05
TGFB3-204ENST00000556285 RALGAPA2Q2PPJ7 1873 aa15.33■□□□□ 0.05
TGFB3-204ENST00000556285 KAT6AQ92794 2004 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 ABHD14A-ACY1A0A1B0GW23 586 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 C17orf102A2RUQ5 167 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 SH2B2O14492 632 aaPredicted RBP15.33■□□□□ 0.04
TGFB3-204ENST00000556285 SLC27A2O14975 620 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 TREHO43280 583 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 GTPBP6O43824 516 aaPredicted RBP15.33■□□□□ 0.04
TGFB3-204ENST00000556285 LGR5O75473 907 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 DDAH1O94760 285 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 GJB5O95377 273 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 HOXC8P31273 242 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 DBF4BQ8NFT6 615 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 CTCFLQ8NI51 663 aaPredicted RBP15.33■□□□□ 0.04
TGFB3-204ENST00000556285 SMARCC2Q8TAQ2 1214 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 RRP36Q96EU6 259 aaKnown RBP15.33■□□□□ 0.04
TGFB3-204ENST00000556285 GPR20Q99678 358 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 RNPEPQ9H4A4 650 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 SUGCTQ9HAC7 445 aa15.33■□□□□ 0.04
TGFB3-204ENST00000556285 LINC01553A4QN01 128 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 PARNO95453 639 aaKnown RBP15.32■□□□□ 0.04
TGFB3-204ENST00000556285 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 SP4Q02446 784 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 IKBKEQ14164 716 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 GNPTABQ3T906 1256 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 UTP14CQ5TAP6 766 aaKnown RBP15.32■□□□□ 0.04
TGFB3-204ENST00000556285 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 METTL7BQ6UX53 244 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 MAP3K14Q99558 947 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 ESYT1Q9BSJ8 1104 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 C11orf16Q9NQ32 467 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
TGFB3-204ENST00000556285 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
TGFB3-204ENST00000556285 FIBPO43427 364 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 CTSHP09668 335 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 KIF5BP33176 963 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 MCM5P33992 734 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 UBE2SQ16763 222 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 PCNX4Q63HM2 1172 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 CREB3L3Q68CJ9 461 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 RAD9AQ99638 391 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 C17orf80Q9BSJ5 609 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
TGFB3-204ENST00000556285 COL4A6Q14031 1691 aa15.31■□□□□ 0.04
TGFB3-204ENST00000556285 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 PIK3CDO00329 1044 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 ATP9AO75110 1047 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 STAM2O75886 525 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 SMARCA1P28370 1054 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 NEDD9Q14511 834 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 CUL5Q93034 780 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 USP26Q9BXU7 913 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 C5orf42Q9H799 3197 aa15.3■□□□□ 0.04
TGFB3-204ENST00000556285 SEC63Q9UGP8 760 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms