RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 MINDY4Q4G0A6 757 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 HABP4Q5JVS0 413 aaKnown RBP3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 KSR2Q6VAB6 950 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 ARHGAP36Q6ZRI8 547 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 PRR23CQ6ZRP0 262 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 CEP68Q76N32 757 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 WAPLQ7Z5K2 1190 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 TPH2Q8IWU9 490 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 AMOTL1Q8IY63 956 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 SAMD3Q8N6K7 520 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 KIAA1958Q8N8K9 716 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 ZNF610Q8N9Z0 462 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 TMEM52Q8NDY8 209 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 TP53INP1Q96A56 240 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 TRMT2BQ96GJ1 504 aaKnown RBP3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 NUP88Q99567 741 aaPredicted RBP3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 SPOCK3Q9BQ16 436 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 DBNDD2Q9BQY9 259 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 OSBPL1AQ9BXW6 950 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 EPB41L1Q9H4G0 881 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 PCIF1Q9H4Z3 704 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 PRDM11Q9NQV5 511 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 ATG3Q9NT62 314 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 BTG4Q9NY30 223 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 OBP2AQ9NY56 170 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 PLAGL2Q9UPG8 496 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 ZNF281Q9Y2X9 895 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 NOC2LQ9Y3T9 749 aaKnown RBP3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 COMMD10Q9Y6G5 202 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 PITPNM2Q9BZ72 1349 aa3.9□□□□□ -1.79
MTHFD1-212ENST00000555858 TMEM265A0A087WTH1 108 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 GOLGA8AA7E2F4 631 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 GOLGA8BA8MQT2 603 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 DVL2O14641 736 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 DGKIO75912 1065 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 LTFP02788 710 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 ESR1P03372 595 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 FPR2P25090 351 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 CHRNA4P43681 627 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 KIF11P52732 1056 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 SCAND1P57086 179 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 PURAQ00577 322 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 GTF2H3Q13889 308 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 BRD3Q15059 726 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 FIGNQ5HY92 759 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 SYCP2LQ5T4T6 812 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 EP400NLQ6ZTU2 488 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 OTOP3Q7RTS5 596 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 PTRH1Q86Y79 214 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 NOSTRINQ8IVI9 506 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 ZZZ3Q8IYH5 903 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 CMTR2Q8IYT2 770 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 NETO1Q8TDF5 533 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 FBXO41Q8TF61 875 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 CLIP3Q96DZ5 547 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 HSPBAP1Q96EW2 488 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 ELF4Q99607 663 aaPredicted RBP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 ZDHHC5Q9C0B5 715 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 LRRC4CQ9HCJ2 640 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 ACSS2Q9NR19 701 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 TOPORSQ9NS56 1045 aaPredicted RBP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 TOMM22Q9NS69 142 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 MARCH2Q9P0N8 246 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 TNFRSF10DQ9UBN6 386 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 GULP1Q9UBP9 304 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 RCAN3Q9UKA8 241 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 COA3Q9Y2R0 106 aaPredicted RBP3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 X6R8D5 127 aa3.89□□□□□ -1.79
MTHFD1-212ENST00000555858 TCRBV5S4A2TA0A5A2 114 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 KLHL33A6NCF5 533 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 C22orf46C9J442 243 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 MAN2B1O00754 1011 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ERC2O15083 957 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 GSC2O15499 205 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 XPOTO43592 962 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 KDM1AO60341 852 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 CLASP2O75122 1294 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 CYP17A1P05093 508 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 COL6A2P12110 1019 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 CEBPAP49715 358 aaPredicted RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 CORO7P57737 925 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ODF1Q14990 250 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 MROH9Q5TGP6 573 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ANGEL2Q5VTE6 544 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 CC2D1AQ6P1N0 951 aaPredicted RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 FRMD7Q6ZUT3 714 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 EPM2AIP1Q7L775 607 aaPredicted RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 CD163Q86VB7 1156 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 RIOX2Q8IUF8 465 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 TEX2Q8IWB9 1127 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 NLGN4XQ8N0W4 816 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 PLD6Q8N2A8 252 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 NLGN2Q8NFZ4 835 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 SHKBP1Q8TBC3 707 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 LMBR1Q8WVP7 490 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ASB11Q8WXH4 323 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 SYTL4Q96C24 671 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms