RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 PCDHA1Q9Y5I3 950 aa14.53□□□□□ -0.08
TMEM253-205ENST00000555314 C17orf102A2RUQ5 167 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 KLRF2D3W0D1 207 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 H3BRB1 525 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 UBA1P22314 1058 aaKnown RBP14.52□□□□□ -0.09
TMEM253-205ENST00000555314 CCND2P30279 289 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 ZNF200P98182 395 aaPredicted RBP14.52□□□□□ -0.09
TMEM253-205ENST00000555314 HIC1Q14526 733 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 PGM5Q15124 567 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 EPC2Q52LR7 807 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.52□□□□□ -0.09
TMEM253-205ENST00000555314 SMC5Q8IY18 1101 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 MYOCDQ8IZQ8 938 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 ATP6V0A1Q93050 837 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 RILPL2Q969X0 211 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 PABPC5Q96DU9 382 aaKnown RBP14.52□□□□□ -0.09
TMEM253-205ENST00000555314 TUT1Q9H6E5 874 aaKnown RBP14.52□□□□□ -0.09
TMEM253-205ENST00000555314 VAT1LQ9HCJ6 419 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 TRIP12Q14669 1992 aaPredicted RBP14.52□□□□□ -0.09
TMEM253-205ENST00000555314 COL4A6Q14031 1691 aa14.52□□□□□ -0.09
TMEM253-205ENST00000555314 POTEB3A0JP26 581 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 PALM3A6NDB9 673 aaPredicted RBP14.51□□□□□ -0.09
TMEM253-205ENST00000555314 GCOM1H8Y6P7 765 aaPredicted RBP14.51□□□□□ -0.09
TMEM253-205ENST00000555314 POLR2MP0CAP2 368 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 MYCLP12524 364 aaPredicted RBP14.51□□□□□ -0.09
TMEM253-205ENST00000555314 ICAM3P32942 547 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 RRP1P56182 461 aaKnown RBP14.51□□□□□ -0.09
TMEM253-205ENST00000555314 SP2Q02086 613 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 IFIT1BQ5T764 474 aaKnown RBP14.51□□□□□ -0.09
TMEM253-205ENST00000555314 FAM117BQ6P1L5 589 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 POTEBQ6S5H4 581 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 METTL7BQ6UX53 244 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 RPAINQ86UA6 219 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 BANK1Q8NDB2 785 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 YTHDC1Q96MU7 727 aaKnown RBP14.51□□□□□ -0.09
TMEM253-205ENST00000555314 YME1L1Q96TA2 773 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 DIAPH3Q9NSV4 1193 aa14.51□□□□□ -0.09
TMEM253-205ENST00000555314 PPP1R11O60927 126 aaPredicted RBP14.5□□□□□ -0.09
TMEM253-205ENST00000555314 LGALS2P05162 132 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 RB1P06400 928 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 SMIM10L2AP0DMW4 78 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 SMIM10L2BP0DMW5 78 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 NEDD9Q14511 834 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 SEC23AQ15436 765 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 TMEM192Q8IY95 271 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 STAG2Q8N3U4 1231 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 INPP4AQ96PE3 977 aaPredicted RBP14.5□□□□□ -0.09
TMEM253-205ENST00000555314 LNPKQ9C0E8 428 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 LMAN2LQ9H0V9 348 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 RNPEPQ9H4A4 650 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 NSUN3Q9H649 340 aaKnown RBP14.5□□□□□ -0.09
TMEM253-205ENST00000555314 RIOX1Q9H6W3 641 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 MAD2L2Q9UI95 211 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 RWDD3Q9Y3V2 267 aa14.5□□□□□ -0.09
TMEM253-205ENST00000555314 FRMPD4Q14CM0 1322 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 FAM86C2PA6NEL3 165 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 C5orf67F2Z3F1 127 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 NOP56O00567 594 aaKnown RBP14.49□□□□□ -0.09
TMEM253-205ENST00000555314 DCXO43602 365 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 IL9P15248 144 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 SSTR3P32745 418 aaPredicted RBP14.49□□□□□ -0.09
TMEM253-205ENST00000555314 ADAM17P78536 824 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 GPM6BQ13491 265 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 XRRA1Q6P2D8 792 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 CWC27Q6UX04 472 aaKnown RBP14.49□□□□□ -0.09
TMEM253-205ENST00000555314 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
TMEM253-205ENST00000555314 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 SENP7Q9BQF6 1050 aa14.49□□□□□ -0.09
TMEM253-205ENST00000555314 UPF3BQ9BZI7 483 aaKnown RBP14.49□□□□□ -0.09
TMEM253-205ENST00000555314 ZNF215Q9UL58 517 aaPredicted RBP14.49□□□□□ -0.09
TMEM253-205ENST00000555314 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
TMEM253-205ENST00000555314 SPATA31C2B4DYI2 1134 aa14.48□□□□□ -0.09
TMEM253-205ENST00000555314 TREHO43280 583 aa14.48□□□□□ -0.09
TMEM253-205ENST00000555314 HOXA13P31271 388 aaPredicted RBP14.48□□□□□ -0.09
TMEM253-205ENST00000555314 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
TMEM253-205ENST00000555314 FAM43BQ6ZT52 329 aaPredicted RBP14.48□□□□□ -0.09
TMEM253-205ENST00000555314 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
TMEM253-205ENST00000555314 C11orf84Q9BUA3 381 aaPredicted RBP14.48□□□□□ -0.09
TMEM253-205ENST00000555314 IFIH1Q9BYX4 1025 aaKnown RBP14.48□□□□□ -0.09
TMEM253-205ENST00000555314 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 COL4A4P53420 1690 aaPredicted RBP14.47□□□□□ -0.09
TMEM253-205ENST00000555314 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.47□□□□□ -0.09
TMEM253-205ENST00000555314 FIBPO43427 364 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 RPLP2P05387 115 aaKnown RBP14.47□□□□□ -0.09
TMEM253-205ENST00000555314 ZP2Q05996 745 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 CSPP1Q1MSJ5 1256 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 CTC1Q2NKJ3 1217 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 TCEAL5Q5H9L2 206 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 ADHFE1Q8IWW8 467 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 GIMAP8Q8ND71 665 aaPredicted RBP14.47□□□□□ -0.09
TMEM253-205ENST00000555314 IL17RAQ96F46 866 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 GPR20Q99678 358 aa14.47□□□□□ -0.09
TMEM253-205ENST00000555314 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
TMEM253-205ENST00000555314 PTPRSQ13332 1948 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms