RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 FGD1P98174 961 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 ZNF200P98182 395 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 CELF3Q5SZQ8 465 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 ALG1Q9BT22 464 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 HIPK3Q9H422 1215 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 MROH7Q68CQ1 1323 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 DOCK5Q9H7D0 1870 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 SPATA31C2B4DYI2 1134 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 STXBP3O00186 592 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 F13A1P00488 732 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 METAP2P50579 478 aaKnown RBP eCLIP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 CCT2P78371 535 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 SP4Q02446 784 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 TRAF1Q13077 416 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 TMEM240Q5SV17 173 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 GDF6Q6KF10 455 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 DEFB123Q8N688 67 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 SAMD3Q8N6K7 520 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 CYP2W1Q8TAV3 490 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PHKBQ93100 1093 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PKD2L1Q9P0L9 805 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PCDHA6Q9UN73 950 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PCDHA8Q9Y5H6 950 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PFKFB2O60825 505 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 ITGB5P18084 799 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PKN1Q16512 942 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 BRDTQ58F21 947 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 CYFIP1Q7L576 1253 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 CUL5Q93034 780 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 WNT8BQ93098 351 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 ZNF274Q96GC6 653 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 RNPC3Q96LT9 517 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 UIMC1Q96RL1 719 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 CXXC1Q9P0U4 656 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 CHD9Q3L8U1 2897 aa11.49□□□□□ -0.57
HNRNPC-219ENST00000555309 PDIA3P30101 505 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 PSEN2P49810 448 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 NAPAP54920 295 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 NTRK3Q16288 839 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 DGKDQ16760 1214 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 PCNX4Q63HM2 1172 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 TRIM50Q86XT4 487 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 DHX38Q92620 1227 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 MLXIPQ9HAP2 919 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 A0A0C4DFX4 3053 aa11.48□□□□□ -0.57
HNRNPC-219ENST00000555309 SCN5AQ14524 2016 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 GOLGA6L3A6NEY3 463 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 SMCO2A6NFE2 343 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 ICAM3P32942 547 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 ZNF445P59923 1031 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 MFSD10Q14728 455 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 KIAA0753Q2KHM9 967 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 NFRKBQ6P4R8 1299 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 TMEM199Q8N511 208 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 NECAB1Q8N987 351 aa11.47□□□□□ -0.57
HNRNPC-219ENST00000555309 HAS3O00219 553 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 KPNA6O60684 536 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 F2P00734 622 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 HOXD8P13378 290 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 PBX2P40425 430 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 HMGN5P82970 282 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 STK3Q13188 491 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 GPNMBQ14956 572 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 PTGISQ16647 500 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 CSPP1Q1MSJ5 1256 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 JAKMIP3Q5VZ66 844 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 GPR20Q99678 358 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 TTYH1Q9H313 450 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 IL23AQ9NPF7 189 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 RIC8AQ9NPQ8 531 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 MTMR10Q9NXD2 777 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 BARHL2Q9NY43 387 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 UBIAD1Q9Y5Z9 338 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 TET1Q8NFU7 2136 aa11.46□□□□□ -0.57
HNRNPC-219ENST00000555309 FIBPO43427 364 aa11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 PPFIA4O75335 1185 aa11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 TGFB3P10600 412 aa11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 KCNA2P16389 499 aa11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 MRE11P49959 708 aa11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 PPIGQ13427 754 aaKnown RBP eCLIP11.46□□□□□ -0.581e-9■□□□□ 9.6
HNRNPC-219ENST00000555309 PFKFB3Q16875 520 aaPredicted RBP11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 TCTN1Q2MV58 587 aa11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 UTP14CQ5TAP6 766 aaKnown RBP11.46□□□□□ -0.58
HNRNPC-219ENST00000555309 RASIP1Q5U651 963 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms