RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 ZSWIM8A7E2V4 1837 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 PPP6R2O75170 966 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 DUSP11O75319 330 aaKnown RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 GH1P01241 217 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 OR52Z1P0C646 297 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 CNGA1P29973 690 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 TXKP42681 527 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 TMEM63BQ5T3F8 832 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 METTL7BQ6UX53 244 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 CYFIP1Q7L576 1253 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 DHX37Q8IY37 1157 aaKnown RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 EMID1Q96A84 441 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 FERMT2Q96AC1 680 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 SDF4Q9BRK5 362 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 FTOQ9C0B1 505 aaKnown RBP eCLIP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 BCAS3Q9H6U6 928 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 TTC12Q9H892 705 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.57
SYNE2-215ENST00000554997 SRPRBQ9Y5M8 271 aaKnown RBP11.52□□□□□ -0.57
SYNE2-215ENST00000554997 SPTLC2O15270 562 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 DYNC1LI2O43237 492 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-215ENST00000554997 MSCO60682 206 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 GAS7O60861 476 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 GGPS1O95749 300 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 NCLP19338 710 aaKnown RBP11.51□□□□□ -0.57
SYNE2-215ENST00000554997 TECP42680 631 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYNE2-215ENST00000554997 NKX3-2P78367 333 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 STK38Q15208 465 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 IL17AQ16552 155 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 LHX8Q68G74 356 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-215ENST00000554997 B3GNT9Q6UX72 402 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 KCNG4Q8TDN1 519 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 GJA10Q969M2 543 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 ARMC5Q96C12 935 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 CHAMP1Q96JM3 812 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 UIMC1Q96RL1 719 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 TEKT3Q9BXF9 490 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 PKD2L1Q9P0L9 805 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
SYNE2-215ENST00000554997 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
SYNE2-215ENST00000554997 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
SYNE2-215ENST00000554997 LCTP09848 1927 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 ADCY6O43306 1168 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-215ENST00000554997 ATG7O95352 703 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 RARBP10826 455 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 MARCKSP29966 332 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-215ENST00000554997 GJA9P57773 515 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 KRT76Q01546 638 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 ARHGAP1Q07960 439 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 PPP2R5CQ13362 524 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 TMEM266Q2M3C6 531 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 IGSF22Q8N9C0 903 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 KRI1Q8N9T8 703 aaKnown RBP11.5□□□□□ -0.57
SYNE2-215ENST00000554997 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-215ENST00000554997 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 COPS5Q92905 334 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 ZNF333Q96JL9 665 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 SPATA32Q96LK8 384 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 RAB34Q9BZG1 259 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 MCOLN1Q9GZU1 580 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 AP5M1Q9H0R1 490 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-215ENST00000554997 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
SYNE2-215ENST00000554997 VAV3Q9UKW4 847 aa11.5□□□□□ -0.57
SYNE2-215ENST00000554997 A6NJR5 290 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 CCNE2O96020 404 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 CCL5P13501 91 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 SFNP31947 248 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 LONP1P36776 959 aaKnown RBP11.49□□□□□ -0.57
SYNE2-215ENST00000554997 ACTR2P61160 394 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 SPIRE1Q08AE8 756 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 MTFR1Q15390 333 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 HSDL1Q3SXM5 330 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-215ENST00000554997 ABHD15Q6UXT9 468 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 SMAP1Q8IYB5 467 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-215ENST00000554997 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
SYNE2-215ENST00000554997 RDM1Q8NG50 284 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 AK8Q96MA6 479 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYNE2-215ENST00000554997 RNF208Q9H0X6 261 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
SYNE2-215ENST00000554997 UNC45AQ9H3U1 944 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 SPC25Q9HBM1 224 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 PAK6Q9NQU5 681 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms