RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	RASGRF1	Q13972	1273 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	RASA3	Q14644	834 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	SLC35F1	Q5T1Q4	408 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	ATG14	Q6ZNE5	492 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	TEX2	Q8IWB9	1127 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	DIO2	Q92813	273 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	SGSM3	Q96HU1	749 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	CCDC113	Q9H0I3	377 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	CNTD2	Q9H8S5	307 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	SLC52A1	Q9NWF4	448 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	MARCH2	Q9P0N8	246 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	EFCAB6	Q5THR3	1501 aa		7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	CFAP65	Q6ZU64	1925 aa	Known RBP	7.56	□□□□□ -1.2
PSMC6-208	ENST00000554956	ZFYVE9	O95405	1425 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	CROCC2	H7BZ55	1655 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	IQCA1L	A6NCM1	817 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	HRK	O00198	91 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	NFIB	O00712	420 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	PRODH	O43272	600 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	SEMA7A	O75326	666 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	CYBB	P04839	570 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	GLDC	P23378	1020 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	RAP1GAP	P47736	663 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	CBX2	Q14781	532 aa	Predicted RBP	7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	E4F1	Q66K89	784 aa	Predicted RBP	7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	PAQR3	Q6TCH7	311 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	USP33	Q8TEY7	942 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	KCTD13	Q8WZ19	329 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	CCDC140	Q96MF4	163 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	DEPDC7	Q96QD5	511 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	SIRT5	Q9NXA8	310 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956	SNTG2	Q9NY99	539 aa		7.55	□□□□□ -1.2
PSMC6-208	ENST00000554956		F8W031	263 aa	Predicted RBP	7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	ADCY3	O60266	1144 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	MED14OS	P0DP75	135 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	FPR2	P25090	351 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	CDR1	P51861	262 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	ZNF200	P98182	395 aa	Predicted RBP	7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	SSRP1	Q08945	709 aa	Known RBP	7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	MAP4K2	Q12851	820 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	KCNAB2	Q13303	367 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	USP53	Q70EK8	1073 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	NLRP10	Q86W26	655 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	LRRC47	Q8N1G4	583 aa	Known RBP	7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	RCBTB1	Q8NDN9	531 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	PLEKHO2	Q8TD55	490 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	OSBP2	Q969R2	916 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	SPATA9	Q9BWV2	254 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	BCAS3	Q9H6U6	928 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	CD320	Q9NPF0	282 aa		7.54	□□□□□ -1.2
PSMC6-208	ENST00000554956	RIMS2	Q9UQ26	1411 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	BLACE	A4D250	179 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	TCAF2	A6NFQ2	919 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	NPIPB6	E9PJ23	425 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	ABLIM1	O14639	778 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	NTRK1	P04629	796 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	PABPC1	P11940	636 aa	Known RBP	7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	LTBR	P36941	435 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	BCL6	P41182	706 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	MAPKAPK2	P49137	400 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	NCKAP1L	P55160	1127 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	PRR5	P85299	388 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	NR1I3	Q14994	352 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	WWC2	Q6AWC2	1192 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	CILP2	Q8IUL8	1156 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	DBR1	Q9UK59	544 aa	Known RBP	7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	SMG5	Q9UPR3	1016 aa	Known RBP	7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	SIT1	Q9Y3P8	196 aa		7.53	□□□□□ -1.2
PSMC6-208	ENST00000554956	ADAMTS13	Q76LX8	1427 aa		7.52	□□□□□ -1.2
PSMC6-208	ENST00000554956	ADGRB3	O60242	1522 aa		7.52	□□□□□ -1.2
PSMC6-208	ENST00000554956	XIRP1	Q702N8	1843 aa	Known RBP	7.52	□□□□□ -1.2
PSMC6-208	ENST00000554956	PLEKHG1	Q9ULL1	1385 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	TRAV20	A0A0B4J274	112 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	C22orf46	C9J442	243 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	FGFR1	P11362	822 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	YBX3	P16989	372 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	RPL11	P62913	178 aa	Known RBP	7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	TMEM62	Q0P6H9	643 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	TESK1	Q15569	626 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	NTRK3	Q16288	839 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	FOXB2	Q5VYV0	432 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	OLFML2B	Q68BL8	750 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	IQCE	Q6IPM2	695 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	ZC3H14	Q6PJT7	736 aa	Known RBP	7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	CABP7	Q86V35	215 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	ZNF669	Q96BR6	464 aa	Predicted RBP	7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	SRPK1	Q96SB4	655 aa	Known RBP	7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	TBX22	Q9Y458	520 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	PCDHA2	Q9Y5H9	948 aa		7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	TIMM13	Q9Y5L4	95 aa	Predicted RBP	7.52	□□□□□ -1.21
PSMC6-208	ENST00000554956	SSPN	Q14714	243 aa		7.51	□□□□□ -1.21
PSMC6-208	ENST00000554956	NSMF	Q6X4W1	530 aa		7.51	□□□□□ -1.21
PSMC6-208	ENST00000554956	LDHD	Q86WU2	507 aa		7.51	□□□□□ -1.21
PSMC6-208	ENST00000554956	RPRD2	Q5VT52	1461 aa	Known RBP	7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	MSH6	P52701	1360 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	DBX1	A6NMT0	343 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms