RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GLT1D1Q96MS3 346 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 PYM1Q9BRP8 204 aaKnown RBP12.54□□□□□ -0.4
SRP54-205ENST00000554803 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 EHD4Q9H223 541 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
SRP54-205ENST00000554803 CD320Q9NPF0 282 aa12.54□□□□□ -0.4
SRP54-205ENST00000554803 TRIOO75962 3097 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 MYH4Q9Y623 1939 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 ARHGAP6O43182 974 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 ZBTB43O43298 467 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 MYOGP15173 224 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 IFNAR1P17181 557 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 CST5P28325 142 aaPredicted RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 ANTXR2P58335 489 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 FANCCQ00597 558 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 DPCR1Q3MIW9 517 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 NT5DC1Q5TFE4 455 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 APOA5Q6Q788 366 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 NCAPG2Q86XI2 1143 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
SRP54-205ENST00000554803 FAM53CQ9NYF3 392 aa12.53□□□□□ -0.4
SRP54-205ENST00000554803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRP54-205ENST00000554803 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
SRP54-205ENST00000554803 A0A0U1RQG5 324 aaPredicted RBP12.52□□□□□ -0.41
SRP54-205ENST00000554803 B4E1Z4 1266 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 ARVCFO00192 962 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 RFXAPO00287 272 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 PRDM1O75626 825 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 CD4P01730 458 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 XBP1P17861 261 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 DSG3P32926 999 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 CYP2C18P33260 490 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 NCAPHQ15003 741 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 RRP12Q5JTH9 1297 aaKnown RBP12.52□□□□□ -0.41
SRP54-205ENST00000554803 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 CYB5R4Q7L1T6 521 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 TMC6Q7Z403 805 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
SRP54-205ENST00000554803 PPP1R13BQ96KQ4 1090 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 DNAI1Q9UI46 699 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 DIS3Q9Y2L1 958 aaKnown RBP12.52□□□□□ -0.41
SRP54-205ENST00000554803 CLIC4Q9Y696 253 aa12.52□□□□□ -0.41
SRP54-205ENST00000554803 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 MYADML2A6NDP7 307 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 STX10O60499 249 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
SRP54-205ENST00000554803 SSRP1Q08945 709 aaKnown RBP12.51□□□□□ -0.41
SRP54-205ENST00000554803 PLS1Q14651 629 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 PTPAQ15257 358 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 ZNF792Q3KQV3 632 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 CERKLQ49MI3 558 aaPredicted RBP12.51□□□□□ -0.41
SRP54-205ENST00000554803 KRT40Q6A162 431 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 FBXL18Q96ME1 805 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 NAA15Q9BXJ9 866 aaKnown RBP12.51□□□□□ -0.41
SRP54-205ENST00000554803 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
SRP54-205ENST00000554803 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
SRP54-205ENST00000554803 EPOPA6NHQ4 379 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 SLC25A27O95847 323 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 PGK2P07205 417 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 ASGR1P07306 291 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 TUBBP07437 444 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 FGRP09769 529 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
SRP54-205ENST00000554803 GUCY1A2P33402 732 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 UBASH3AP57075 661 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 CBX1P83916 185 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 GABPAQ06546 454 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 E4F1Q66K89 784 aaPredicted RBP12.5□□□□□ -0.41
SRP54-205ENST00000554803 KRBA2Q6ZNG9 492 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 C16orf86Q6ZW13 317 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 NOSTRINQ8IVI9 506 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 PCSK9Q8NBP7 692 aaKnown RBP12.5□□□□□ -0.41
SRP54-205ENST00000554803 CNNM3Q8NE01 707 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 ENOX1Q8TC92 643 aaKnown RBP12.5□□□□□ -0.41
SRP54-205ENST00000554803 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 MMP19Q99542 508 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 FTOQ9C0B1 505 aaKnown RBP eCLIP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms