RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 OTOP3Q7RTS5 596 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 TRIM48Q8IWZ4 208 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 ZDHHC14Q8IZN3 488 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 PHOSPHO1Q8TCT1 267 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 EXOC2Q96KP1 924 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 XYLT2Q9H1B5 865 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 LAMC3Q9Y6N6 1575 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 OTOL1A6NHN0 477 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-225ENST00000554214 FAM47E-STBD1D6RA91 191 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 AQP7O14520 342 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 SLC27A2O14975 620 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 GNAT1P11488 350 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 CYP4F22Q6NT55 531 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 LILRA6Q6PI73 481 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-225ENST00000554214 NPM2Q86SE8 214 aaKnown RBP7.17□□□□□ -1.26
ATXN3-225ENST00000554214 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
ATXN3-225ENST00000554214 SP8Q8IXZ3 490 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 KYQ8NBH2 561 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 CLEC4DQ8WXI8 215 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 C20orf173Q96LM9 149 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 ALG1Q9BT22 464 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 ASH2LQ9UBL3 628 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 RAPGEFL1Q9UHV5 662 aa7.17□□□□□ -1.26
ATXN3-225ENST00000554214 LRG1P02750 347 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 C6orf222P0C671 652 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-225ENST00000554214 SARSP49591 514 aaKnown RBP7.16□□□□□ -1.26
ATXN3-225ENST00000554214 ZC3H12BQ5HYM0 836 aaKnown RBP7.16□□□□□ -1.26
ATXN3-225ENST00000554214 CARFQ8N187 725 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 TTLL6Q8N841 843 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 DRC1Q96MC2 740 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 DTLQ9NZJ0 730 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 MRPS23Q9Y3D9 190 aaKnown RBP7.16□□□□□ -1.26
ATXN3-225ENST00000554214 PCDHA8Q9Y5H6 950 aa7.16□□□□□ -1.26
ATXN3-225ENST00000554214 NKRFO15226 690 aaKnown RBP eCLIP7.15□□□□□ -1.26
ATXN3-225ENST00000554214 ITGA1P56199 1179 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 CTSWP56202 376 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 GABREP78334 506 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 GUCY1A3Q02108 690 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 GRIN1Q05586 938 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 PAK1Q13153 545 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 TEPPQ6URK8 271 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-225ENST00000554214 OSBPL2Q9H1P3 480 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 NTMQ9P121 344 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 NUB1Q9Y5A7 615 aa7.15□□□□□ -1.26
ATXN3-225ENST00000554214 THBS2P35442 1172 aa7.14□□□□□ -1.27
ATXN3-225ENST00000554214 TUSC3Q13454 348 aa7.14□□□□□ -1.27
ATXN3-225ENST00000554214 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
ATXN3-225ENST00000554214 MTDHQ86UE4 582 aaKnown RBP7.14□□□□□ -1.27
ATXN3-225ENST00000554214 LILRB2Q8N423 598 aa7.14□□□□□ -1.27
ATXN3-225ENST00000554214 DSEQ9UL01 958 aa7.14□□□□□ -1.27
ATXN3-225ENST00000554214 PCDHA9Q9Y5H5 950 aa7.14□□□□□ -1.27
ATXN3-225ENST00000554214 RIMBP3CA6NJZ7 1639 aa7.13□□□□□ -1.27
ATXN3-225ENST00000554214 RIMBP3BA6NNM3 1639 aa7.13□□□□□ -1.27
ATXN3-225ENST00000554214 RIMBP3Q9UFD9 1639 aa7.13□□□□□ -1.27
ATXN3-225ENST00000554214 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
ATXN3-225ENST00000554214 LTFP02788 710 aa7.13□□□□□ -1.27
ATXN3-225ENST00000554214 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
ATXN3-225ENST00000554214 HABP4Q5JVS0 413 aaKnown RBP7.13□□□□□ -1.27
ATXN3-225ENST00000554214 PCDH19Q8TAB3 1148 aa7.13□□□□□ -1.27
ATXN3-225ENST00000554214 UHMK1Q8TAS1 419 aaKnown RBP7.13□□□□□ -1.27
ATXN3-225ENST00000554214 THAP3Q8WTV1 239 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-225ENST00000554214 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-225ENST00000554214 MRC2Q9UBG0 1479 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 A0A0G2JLL6 359 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-225ENST00000554214 SRGAP2CP0DJJ0 459 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 NAT1P18440 290 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 NFE2L2Q16236 605 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 NT5DC1Q5TFE4 455 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 JMYQ8N9B5 988 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 FBXW5Q969U6 566 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 CATSPERZQ9NTU4 200 aa7.12□□□□□ -1.27
ATXN3-225ENST00000554214 CCDC163A0A0D9SF12 145 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 DDX3XO00571 662 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATXN3-225ENST00000554214 CRTAMO95727 393 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 ADAM9Q13443 819 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 BMS1Q14692 1282 aaKnown RBP7.11□□□□□ -1.27
ATXN3-225ENST00000554214 TMC5Q6UXY8 1006 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-225ENST00000554214 OSTM1Q86WC4 334 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 RELTQ969Z4 430 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 CLIC6Q96NY7 704 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 USP40Q9NVE5 1235 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 HSPBP1Q9NZL4 362 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 NDOR1Q9UHB4 597 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 WASF3Q9UPY6 502 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 TELO2Q9Y4R8 837 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 MROH2BQ7Z745 1585 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 WDR62O43379 1518 aa7.11□□□□□ -1.27
ATXN3-225ENST00000554214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-225ENST00000554214 TCRBV5S4A2TA0A5A2 114 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 ARVCFO00192 962 aa7.1□□□□□ -1.27
ATXN3-225ENST00000554214 WNT9AO14904 365 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms