RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 IGHDP01880 384 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 CXCL10P02778 98 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 AMHP03971 560 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 UBA1P22314 1058 aaKnown RBP10.22□□□□□ -0.77
TDP1-208ENST00000553989 TRAF1Q13077 416 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 GPNMBQ14956 572 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 TMEM132AQ24JP5 1023 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 HSDL1Q3SXM5 330 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 CELF3Q5SZQ8 465 aaKnown RBP10.22□□□□□ -0.77
TDP1-208ENST00000553989 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
TDP1-208ENST00000553989 ATP6V0A1Q93050 837 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 FAM122AQ96E09 287 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 UPF2Q9HAU5 1272 aaKnown RBP10.22□□□□□ -0.77
TDP1-208ENST00000553989 MAP3K20Q9NYL2 800 aaKnown RBP10.22□□□□□ -0.77
TDP1-208ENST00000553989 KIAA1217Q5T5P2 1943 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 EMSYQ7Z589 1322 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
TDP1-208ENST00000553989 LINC01553A4QN01 128 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 RSPH10B2B2RC85 870 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 HAS3O00219 553 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 OPLAHO14841 1288 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.77
TDP1-208ENST00000553989 EIF5BO60841 1220 aaKnown RBP10.21□□□□□ -0.77
TDP1-208ENST00000553989 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
TDP1-208ENST00000553989 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 CTSHP09668 335 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 RSPH10BP0C881 870 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.77
TDP1-208ENST00000553989 TCTN1Q2MV58 587 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 GNPTABQ3T906 1256 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 IL31RAQ8NI17 732 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 PIBF1Q8WXW3 757 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 WNT8BQ93098 351 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 PIGSQ96S52 555 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 SUGCTQ9HAC7 445 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 LMCD1Q9NZU5 365 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 MAD2L2Q9UI95 211 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 HCN4Q9Y3Q4 1203 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 INSL6Q9Y581 213 aa10.21□□□□□ -0.77
TDP1-208ENST00000553989 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 H3BRB1 525 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 RBAK-RBAKDNI3L0D1 243 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 RGS20O76081 388 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 LGALS2P05162 132 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SMIM10L2AP0DMW4 78 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SMIM10L2BP0DMW5 78 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 TGFB3P10600 412 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 PLA2G5P39877 138 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 ERVK-21P61565 698 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SP4Q02446 784 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 PTPRSQ13332 1948 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 GRM4Q14833 912 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 WTAPQ15007 396 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SEC23AQ15436 765 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 TRIM71Q2Q1W2 868 aaKnown RBP10.2□□□□□ -0.78
TDP1-208ENST00000553989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
TDP1-208ENST00000553989 EP400NLQ6ZTU2 488 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 STOX1Q6ZVD7 989 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 CYB5R4Q7L1T6 521 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SERINC5Q86VE9 423 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 VSIG10LQ86VR7 867 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SAMD3Q8N6K7 520 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 DBF4BQ8NFT6 615 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 SEPT8Q92599 483 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 GPKOWQ92917 476 aaPredicted RBP eCLIP10.2□□□□□ -0.78
TDP1-208ENST00000553989 YME1L1Q96TA2 773 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 EPHX3Q9H6B9 360 aa10.2□□□□□ -0.78
TDP1-208ENST00000553989 TUT1Q9H6E5 874 aaKnown RBP10.2□□□□□ -0.78
TDP1-208ENST00000553989 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
TDP1-208ENST00000553989 UPP2O95045 317 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 GNAT1P11488 350 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
TDP1-208ENST00000553989 KCNA5P22460 613 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 SSTR3P32745 418 aaPredicted RBP10.19□□□□□ -0.78
TDP1-208ENST00000553989 SP2Q02086 613 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 GHRHRQ02643 423 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 NEDD9Q14511 834 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 HIC1Q14526 733 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 MBTPS1Q14703 1052 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 PTPROQ16827 1216 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 TMEM31Q5JXX7 168 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 UTP14CQ5TAP6 766 aaKnown RBP10.19□□□□□ -0.78
TDP1-208ENST00000553989 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 CATIPQ7Z7H3 387 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 RUFY2Q8WXA3 655 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 CUL5Q93034 780 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 MTMR8Q96EF0 704 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 C17orf80Q9BSJ5 609 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 C16orf70Q9BSU1 422 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 IL25Q9H293 177 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 UBE2ZQ9H832 354 aaPredicted RBP10.19□□□□□ -0.78
TDP1-208ENST00000553989 RTEL1Q9NZ71 1219 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 ZNF215Q9UL58 517 aaPredicted RBP10.19□□□□□ -0.78
TDP1-208ENST00000553989 MYH7BA7E2Y1 1941 aa10.19□□□□□ -0.78
TDP1-208ENST00000553989 NCOR1O75376 2440 aa10.18□□□□□ -0.78
TDP1-208ENST00000553989 PNMA6FA0A0J9YX94 578 aa10.18□□□□□ -0.78
TDP1-208ENST00000553989 TREHO43280 583 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms