RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 OSBPL3Q9H4L5 887 aa20.56■□□□□ 0.88
SYNE2-211ENST00000553801 GRXCR2A6NFK2 248 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 NOP56O00567 594 aaKnown RBP20.55■□□□□ 0.88
SYNE2-211ENST00000553801 SMIM10L2AP0DMW4 78 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 SMIM10L2BP0DMW5 78 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 AAMPQ13685 434 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 GNPTABQ3T906 1256 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 PLEKHM2Q8IWE5 1019 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 TOP1MTQ969P6 601 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 RWDD1Q9H446 243 aaPredicted RBP20.55■□□□□ 0.88
SYNE2-211ENST00000553801 MAD2L2Q9UI95 211 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 FAM50BQ9Y247 325 aa20.55■□□□□ 0.88
SYNE2-211ENST00000553801 PALM3A6NDB9 673 aaPredicted RBP20.54■□□□□ 0.88
SYNE2-211ENST00000553801 H3BNC9 293 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 PPP1R11O60927 126 aaPredicted RBP20.54■□□□□ 0.88
SYNE2-211ENST00000553801 LGALS2P05162 132 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 IL9P15248 144 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 HOXC8P31273 242 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 GPM6BQ13491 265 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 FCHSD1Q86WN1 690 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 SMC5Q8IY18 1101 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 BANK1Q8NDB2 785 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 IL31RAQ8NI17 732 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 NEK9Q8TD19 979 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 APBB2Q92870 758 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 RNPEPQ9H4A4 650 aa20.54■□□□□ 0.88
SYNE2-211ENST00000553801 MUC6Q6W4X9 2439 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 TREHO43280 583 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 STAM2O75886 525 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 UPP2O95045 317 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 NEDD9Q14511 834 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 SEC23AQ15436 765 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 CHD1LQ86WJ1 897 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 HOMER1Q86YM7 354 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
SYNE2-211ENST00000553801 CSPP1Q1MSJ5 1256 aa20.52■□□□□ 0.88
SYNE2-211ENST00000553801 GPKOWQ92917 476 aaPredicted RBP eCLIP20.52■□□□□ 0.88
SYNE2-211ENST00000553801 PABPC5Q96DU9 382 aaKnown RBP20.52■□□□□ 0.88
SYNE2-211ENST00000553801 RIOX1Q9H6W3 641 aa20.52■□□□□ 0.88
SYNE2-211ENST00000553801 PIEZO1Q92508 2521 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 H3BQ06 376 aaPredicted RBP20.51■□□□□ 0.87
SYNE2-211ENST00000553801 NCK2O43639 380 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 CTSHP09668 335 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 ICAM3P32942 547 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 TRDNQ13061 729 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 METTL7BQ6UX53 244 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 ZFP91Q96JP5 570 aaPredicted RBP20.51■□□□□ 0.87
SYNE2-211ENST00000553801 PIGSQ96S52 555 aa20.51■□□□□ 0.87
SYNE2-211ENST00000553801 IFIH1Q9BYX4 1025 aaKnown RBP20.51■□□□□ 0.87
SYNE2-211ENST00000553801 NSUN3Q9H649 340 aaKnown RBP20.51■□□□□ 0.87
SYNE2-211ENST00000553801 ZNF215Q9UL58 517 aaPredicted RBP20.51■□□□□ 0.87
SYNE2-211ENST00000553801 BAZ2BQ9UIF8 2168 aaKnown RBP20.51■□□□□ 0.87
SYNE2-211ENST00000553801 PNMA6FA0A0J9YX94 578 aa20.5■□□□□ 0.87
SYNE2-211ENST00000553801 GRM4Q14833 912 aa20.5■□□□□ 0.87
SYNE2-211ENST00000553801 TCEAL5Q5H9L2 206 aa20.5■□□□□ 0.87
SYNE2-211ENST00000553801 EP400NLQ6ZTU2 488 aa20.5■□□□□ 0.87
SYNE2-211ENST00000553801 SETD4Q9NVD3 440 aa20.5■□□□□ 0.87
SYNE2-211ENST00000553801 PRKAG3Q9UGI9 489 aa20.5■□□□□ 0.87
SYNE2-211ENST00000553801 KAT6AQ92794 2004 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 MYO7AQ13402 2215 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.49■□□□□ 0.87
SYNE2-211ENST00000553801 ERICH2A1L162 156 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 SPATA31C2B4DYI2 1134 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 NUCB1Q02818 461 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 FAM26DQ5JW98 314 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 CYB5R4Q7L1T6 521 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 CYFIP1Q7L576 1253 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 FIBCD1Q8N539 461 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 IL17RAQ96F46 866 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 INPP4AQ96PE3 977 aaPredicted RBP20.49■□□□□ 0.87
SYNE2-211ENST00000553801 UIMC1Q96RL1 719 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 GPR20Q99678 358 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 RWDD3Q9Y3V2 267 aa20.49■□□□□ 0.87
SYNE2-211ENST00000553801 COL4A6Q14031 1691 aa20.48■□□□□ 0.87
SYNE2-211ENST00000553801 FIBPO43427 364 aa20.48■□□□□ 0.87
SYNE2-211ENST00000553801 DCXO43602 365 aa20.48■□□□□ 0.87
SYNE2-211ENST00000553801 RB1P06400 928 aa20.48■□□□□ 0.87
SYNE2-211ENST00000553801 COL19A1Q14993 1142 aa20.48■□□□□ 0.87
SYNE2-211ENST00000553801 BCAS3Q9H6U6 928 aa20.48■□□□□ 0.87
SYNE2-211ENST00000553801 NLRC5Q86WI3 1866 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 RBAK-RBAKDNI3L0D1 243 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 IFIT3O14879 490 aaKnown RBP20.47■□□□□ 0.87
SYNE2-211ENST00000553801 MRPS9P82933 396 aaKnown RBP20.47■□□□□ 0.87
SYNE2-211ENST00000553801 ARHGAP4P98171 946 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 SENP7Q9BQF6 1050 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 OSBPL7Q9BZF2 842 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 UPF3BQ9BZI7 483 aaKnown RBP20.47■□□□□ 0.87
SYNE2-211ENST00000553801 LMAN2LQ9H0V9 348 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 CLDND1Q9NY35 253 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 RTEL1Q9NZ71 1219 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
SYNE2-211ENST00000553801 RALGAPA2Q2PPJ7 1873 aa20.46■□□□□ 0.87
SYNE2-211ENST00000553801 CTNNB1P35222 781 aa20.46■□□□□ 0.87
SYNE2-211ENST00000553801 ADAM17P78536 824 aa20.46■□□□□ 0.87
SYNE2-211ENST00000553801 SART3Q15020 963 aaKnown RBP20.46■□□□□ 0.87
SYNE2-211ENST00000553801 SLC35G1Q2M3R5 365 aa20.46■□□□□ 0.87
SYNE2-211ENST00000553801 UTP14CQ5TAP6 766 aaKnown RBP20.46■□□□□ 0.87
SYNE2-211ENST00000553801 XRRA1Q6P2D8 792 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms