RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 PCDHGB3Q9Y5G1 929 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 ANKRD26Q9UPS8 1709 aa5.47□□□□□ -1.53
PFDN5-219ENST00000553171 TCF20Q9UGU0 1960 aaKnown RBP5.47□□□□□ -1.53
PFDN5-219ENST00000553171 KLRG2A4D1S0 409 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 TRIM64A6NGJ6 449 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 TRIM64BA6NI03 449 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 HNRNPCL2B2RXH8 293 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 RASA4BC9J798 803 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 BHMG1C9JSJ3 638 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 UBE2Q2LH0YL09 131 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 H7C1D1 291 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 ZBTB39O15060 712 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 ERC2O15083 957 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 SART1O43290 800 aaKnown RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 HNRNPCL1O60812 293 aaKnown RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 TADA3O75528 432 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 RTN3O95197 1032 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 SGPL1O95470 568 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 CYP1A2P05177 515 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 CCL5P13501 91 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 KRT10P13645 584 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 NPR1P16066 1061 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 DESP17661 470 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 WEE1P30291 646 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 DDIT3P35638 169 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 TCF7P36402 384 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 SKIV2L2P42285 1042 aaKnown RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 SEC13P55735 322 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 GABREP78334 506 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 MRPS35P82673 323 aaKnown RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 PLIN5Q00G26 463 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 ROR1Q01973 937 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 LRRC74AQ0VAA2 488 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 PAK2Q13177 524 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 CRHR2Q13324 411 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 TUBA3CQ13748 450 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 INAQ16352 499 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 PLEKHG4Q58EX7 1191 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 WDR44Q5JSH3 913 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 SWSAP1Q6NVH7 229 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 HIBCHQ6NVY1 386 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 ERAP2Q6P179 960 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 USP51Q70EK9 711 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 NIM1KQ8IY84 436 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 CARNMT1Q8N4J0 409 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 LINC00469Q8N7U9 141 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 FAM81AQ8TBF8 368 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 EZH1Q92800 747 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 HPS3Q969F9 1004 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 THAP11Q96EK4 314 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 NELL2Q99435 816 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 AP1M1Q9BXS5 423 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 IRX2Q9BZI1 471 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 TGIF2Q9GZN2 237 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 BRD8Q9H0E9 1235 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 SEMA4AQ9H3S1 761 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 OSBPL3Q9H4L5 887 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 PRM3Q9NNZ6 103 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 HCSTQ9UBK5 93 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 POLKQ9UBT6 870 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 CARD8Q9Y2G2 431 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 BOLA1Q9Y3E2 137 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 USP9XQ93008 2570 aaPredicted RBP5.46□□□□□ -1.54
PFDN5-219ENST00000553171 ZNF521Q96K83 1311 aa5.46□□□□□ -1.54
PFDN5-219ENST00000553171 FAM186AA6NE01 2351 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 KIF24Q5T7B8 1368 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 MAP1BP46821 2468 aaKnown RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 MED19A0JLT2 244 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 GOLGA6L4A6NEF3 574 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 MANSC4A6NHS7 340 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 AKR1B15C9JRZ8 316 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 KIF2AO00139 706 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 IGF2BP3O00425 579 aaKnown RBP eCLIP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 ABLIM1O14639 778 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 RASA4O43374 803 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 FOXD2O60548 495 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 SNX2O60749 519 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 ZNF254O75437 659 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 FRAT2O75474 233 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 ZNF189O75820 626 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 YEATS4O95619 227 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 BAG2O95816 211 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 S100A6P06703 90 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 SLC5A1P13866 664 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 GLULP15104 373 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 RASA1P20936 1047 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 RPL13P26373 211 aaKnown RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 ATP5DP30049 168 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 ID4P47928 161 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 RAB27AP51159 221 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 POLR2FP61218 127 aaKnown RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 SMAD3P84022 425 aaKnown RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 SLFN5Q08AF3 891 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 PABPC4Q13310 644 aaKnown RBP eCLIP5.45□□□□□ -1.546e-11■■■□□ 16
PFDN5-219ENST00000553171 NEDD9Q14511 834 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 NFE2Q16621 373 aaPredicted RBP5.45□□□□□ -1.54
PFDN5-219ENST00000553171 WASHC4Q2M389 1173 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 PROSER3Q2NL68 480 aa5.45□□□□□ -1.54
PFDN5-219ENST00000553171 ANO1Q5XXA6 986 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms