RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	NLRX1	Q86UT6	975 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	SESTD1	Q86VW0	696 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	CDHR1	Q96JP9	859 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	GLT1D1	Q96MS3	346 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	TOX2	Q96NM4	488 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	GPR20	Q99678	358 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	AGO4	Q9HCK5	861 aa	Known RBP	11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	STARD7	Q9NQZ5	370 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	PDLIM7	Q9NR12	457 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	POLR3E	Q9NVU0	708 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	TBX21	Q9UL17	535 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	NFASC	O94856	1347 aa		11.54	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	LTBP2	Q14767	1821 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	LAMA3	Q16787	3333 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154		A0A0U1RQG5	324 aa	Predicted RBP	11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	GSTTP1	A0A1W2PQM5	241 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	FAM205C	A6NFA0	338 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154		H0YGN5	161 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	ARVCF	O00192	962 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	MYCN	P04198	464 aa	Predicted RBP	11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	USP11	P51784	963 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	PSMC6	P62333	389 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	HMGN5	P82970	282 aa	Known RBP	11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	TLE2	Q04725	743 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	FAAP100	Q0VG06	881 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	NR5A1	Q13285	461 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	ITGA7	Q13683	1181 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	NEDD9	Q14511	834 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	B3GNT9	Q6UX72	402 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	KRT25	Q7Z3Z0	450 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	DHX37	Q8IY37	1157 aa	Known RBP	11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	TBCK	Q8TEA7	893 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	SPATA33	Q96N06	139 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	PCYT2	Q99447	389 aa		11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	MTG1	Q9BT17	334 aa	Predicted RBP	11.53	□□□□□ -0.56
CALCOCO1-222	ENST00000553154	WNT7A	O00755	349 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	KIAA0355	O15063	1070 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ZEB2	O60315	1214 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	EVI5	O60447	810 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	PPFIA4	O75335	1185 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ATG7	O95352	703 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	TDP2	O95551	362 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	CCNE2	O96020	404 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SET	Q01105	290 aa	Predicted RBP	11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	HIC1	Q14526	733 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154		Q4G0T1	1027 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	CYFIP1	Q7L576	1253 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SH3RF1	Q7Z6J0	888 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	C7orf61	Q8IZ16	206 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	FBXO18	Q8NFZ0	1043 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SEZ6L	Q9BYH1	1024 aa		11.52	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	MYH7B	A7E2Y1	1941 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	IGKV6D-21	A0A0A0MT36	114 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	TRIM43B	A6NCK2	446 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	BTBD18	B2RXH4	712 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	MSH4	O15457	936 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SORBS3	O60504	671 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	LGR5	O75473	907 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	LGALS2	P05162	132 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	MYL3	P08590	195 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ZNF286B	P0CG31	522 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ITGB8	P26012	769 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	PTPN11	Q06124	597 aa	Predicted RBP	11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	NONO	Q15233	471 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	DGKD	Q16760	1214 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	INF2	Q27J81	1249 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	NFRKB	Q6P4R8	1299 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	PLA2G4D	Q86XP0	818 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	DIS3L2	Q8IYB7	885 aa	Known RBP	11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ETNPPL	Q8TBG4	499 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	DPF3	Q92784	378 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SLC5A5	Q92911	643 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SNX21	Q969T3	373 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	GDF15	Q99988	308 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	JPH1	Q9HDC5	661 aa	Predicted RBP	11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	EMSY	Q7Z589	1322 aa		11.51	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	KIF28P	B7ZC32	967 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	SLC37A4	O43826	429 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	B4GALT4	O60513	344 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	XBP1	P17861	261 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	KRT2	P35908	639 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ADAM17	P78536	824 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	NBPF20	Q3BBV1	942 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	BRDT	Q58F21	947 aa	Predicted RBP	11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	PPP4R3A	Q6IN85	833 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	NEK8	Q86SG6	692 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	TRIM50	Q86XT4	487 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	VWCE	Q96DN2	955 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	MLXIP	Q9HAP2	919 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	KCNMB3	Q9NPA1	279 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	ATP11B	Q9Y2G3	1177 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	NR2E3	Q9Y5X4	410 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	MROH7	Q68CQ1	1323 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	DNAH12	Q6ZR08	3092 aa		11.5	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	IPO5	O00410	1097 aa	Known RBP	11.49	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	PQBP1	O60828	265 aa	Known RBP	11.49	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	PSMD10	O75832	226 aa		11.49	□□□□□ -0.57
CALCOCO1-222	ENST00000553154	CLTB	P09497	229 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms