RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 SP4Q02446 784 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 C1orf53Q5VUE5 145 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 PIK3AP1Q6ZUJ8 805 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 PLA2G4DQ86XP0 818 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 DPF3Q92784 378 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 KAT2BQ92831 832 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 C8orf76Q96K31 380 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 GPR20Q99678 358 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 MLXIPQ9HAP2 919 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
GCN1-209ENST00000551920 SCN10AQ9Y5Y9 1956 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
GCN1-209ENST00000551920 CCDC194A0A1B0GVG4 234 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 CABYRO75952 493 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 CDK7P50613 346 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 USP11P51784 963 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 TRIM29Q14134 588 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 PRR16Q569H4 304 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
GCN1-209ENST00000551920 FAM184AQ8NB25 1140 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 SLC43A3Q8NBI5 491 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 FBXO18Q8NFZ0 1043 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 MTG1Q9BT17 334 aaPredicted RBP18.61■□□□□ 0.57
GCN1-209ENST00000551920 ATP11BQ9Y2G3 1177 aa18.61■□□□□ 0.57
GCN1-209ENST00000551920 WNT7AO00755 349 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 MAFGO15525 162 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 EVI5O60447 810 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 F2P00734 622 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 GJB2P29033 226 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 SETQ01105 290 aaPredicted RBP18.6■□□□□ 0.57
GCN1-209ENST00000551920 TLE2Q04725 743 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 ITGA7Q13683 1181 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 DGKDQ16760 1214 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 TRIM50Q86XT4 487 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 MBOAT7Q96N66 472 aa18.6■□□□□ 0.57
GCN1-209ENST00000551920 NFASCO94856 1347 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 CYP3A7-CYP3A51PA0A087WV96 503 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 KIF28PB7ZC32 967 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 K7ELQ4 463 aaPredicted RBP18.59■□□□□ 0.57
GCN1-209ENST00000551920 ARVCFO00192 962 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 DHX15O43143 795 aaKnown RBP18.59■□□□□ 0.57
GCN1-209ENST00000551920 SLC37A4O43826 429 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 KPNA6O60684 536 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
GCN1-209ENST00000551920 CCNE2O96020 404 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 CYP3A7P24462 503 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 ANKRD33Q7Z3H0 272 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 NEK8Q86SG6 692 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 GIMAP8Q8ND71 665 aaPredicted RBP18.59■□□□□ 0.57
GCN1-209ENST00000551920 SNX21Q969T3 373 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 VTI1AQ96AJ9 217 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 C16orf70Q9BSU1 422 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 BRMS1Q9HCU9 246 aa18.59■□□□□ 0.57
GCN1-209ENST00000551920 JPH1Q9HDC5 661 aaPredicted RBP18.59■□□□□ 0.57
GCN1-209ENST00000551920 GSTTP1A0A1W2PQM5 241 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 H0YGN5 161 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 IPO5O00410 1097 aaKnown RBP18.58■□□□□ 0.56
GCN1-209ENST00000551920 NOP56O00567 594 aaKnown RBP18.58■□□□□ 0.56
GCN1-209ENST00000551920 MSH4O15457 936 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 PPFIA4O75335 1185 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 LGALS2P05162 132 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 NBPF20Q3BBV1 942 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 MOXD1Q6UVY6 613 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 FAM126BQ8IXS8 530 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 GJA10Q969M2 543 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 ZNF577Q9BSK1 485 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 PDLIM7Q9NR12 457 aa18.58■□□□□ 0.56
GCN1-209ENST00000551920 ZMYND8Q9ULU4 1186 aaPredicted RBP18.58■□□□□ 0.56
GCN1-209ENST00000551920 DDX39AO00148 427 aaKnown RBP18.57■□□□□ 0.56
GCN1-209ENST00000551920 HAS3O00219 553 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 Q4G0T1 1027 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 SH3RF1Q7Z6J0 888 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 ETNPPLQ8TBG4 499 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 SLC9A2Q9UBY0 812 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 SMC3Q9UQE7 1217 aa18.57■□□□□ 0.56
GCN1-209ENST00000551920 RANBP2P49792 3224 aaKnown RBP18.56■□□□□ 0.56
GCN1-209ENST00000551920 CEP290O15078 2479 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 SYN1P17600 705 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 TCF7P36402 384 aaPredicted RBP18.56■□□□□ 0.56
GCN1-209ENST00000551920 PSEN2P49810 448 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 ACTR2P61160 394 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 FAAP100Q0VG06 881 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 MFSD10Q14728 455 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 SLC5A5Q92911 643 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 PCYT2Q99447 389 aa18.56■□□□□ 0.56
GCN1-209ENST00000551920 DDX25Q9UHL0 483 aaKnown RBP18.56■□□□□ 0.56
GCN1-209ENST00000551920 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.56■□□□□ 0.56
GCN1-209ENST00000551920 B4GALT4O60513 344 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 CD4P01730 458 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 SAFBQ15424 915 aaKnown RBP eCLIP18.55■□□□□ 0.56
GCN1-209ENST00000551920 KIAA0753Q2KHM9 967 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 UTP14CQ5TAP6 766 aaKnown RBP18.55■□□□□ 0.56
GCN1-209ENST00000551920 PPP4R3AQ6IN85 833 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 TOX2Q96NM4 488 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
GCN1-209ENST00000551920 FOXP1Q9H334 677 aaPredicted RBP18.55■□□□□ 0.56
GCN1-209ENST00000551920 KCNMB3Q9NPA1 279 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms