RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 METTL7BQ6UX53 244 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 CYFIP1Q7L576 1253 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 TRIM50Q86XT4 487 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 BRF1Q92994 677 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 PGBD1Q96JS3 809 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 GPR20Q99678 358 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 PCDHA6Q9UN73 950 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 YBX2Q9Y2T7 364 aaKnown RBP14.98□□□□□ -0.01
NPAS3-209ENST00000551008 PCDHA8Q9Y5H6 950 aa14.98□□□□□ -0.01
NPAS3-209ENST00000551008 V9GY48 417 aaPredicted RBP14.98□□□□□ -0.01
NPAS3-209ENST00000551008 TMEM265A0A087WTH1 108 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 HMGB1P09429 215 aaKnown RBP14.97□□□□□ -0.01
NPAS3-209ENST00000551008 CLK2P49760 499 aaKnown RBP14.97□□□□□ -0.01
NPAS3-209ENST00000551008 MBTPS1Q14703 1052 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 NTRK3Q16288 839 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 PKN1Q16512 942 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 GNPTABQ3T906 1256 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 XRRA1Q6P2D8 792 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 BLOC1S2Q6QNY1 142 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 DEFB128Q7Z7B8 93 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 MYLIPQ8WY64 445 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 CUL5Q93034 780 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 RIC8AQ9NPQ8 531 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 REV3LO60673 3130 aa14.97□□□□□ -0.01
NPAS3-209ENST00000551008 LOXHD1Q8IVV2 1947 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 TRANK1O15050 2925 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 REC8O95072 547 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 EVCP57679 992 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 TOB2Q14106 344 aaPredicted RBP14.96□□□□□ -0.01
NPAS3-209ENST00000551008 GRIN2CQ14957 1233 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 PPP1R18Q6NYC8 613 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 GPRASP2Q96D09 838 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 SENP7Q9BQF6 1050 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 KATNAL1Q9BW62 490 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 BARHL2Q9NY43 387 aa14.96□□□□□ -0.01
NPAS3-209ENST00000551008 H3BRB1 525 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 NBNO60934 754 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 NEFLP07196 543 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 PFKMP08237 780 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 CKBP12277 381 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 RABGGTBP53611 331 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 NAPAP54920 295 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 NEDD9Q14511 834 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 C7orf31Q8N865 590 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 CYP2W1Q8TAV3 490 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 AFAP1L1Q8TED9 768 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 CRYGNQ8WXF5 182 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 TIFAQ96CG3 184 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 OSBPL7Q9BZF2 842 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 TUT1Q9H6E5 874 aaKnown RBP14.95□□□□□ -0.02
NPAS3-209ENST00000551008 ZSWIM6Q9HCJ5 1215 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 PPP4R2Q9NY27 417 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 CUL9Q8IWT3 2517 aa14.95□□□□□ -0.02
NPAS3-209ENST00000551008 COL4A4P53420 1690 aaPredicted RBP14.94□□□□□ -0.02
NPAS3-209ENST00000551008 GSTTP1A0A1W2PQM5 241 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 EPB41L2O43491 1005 aaKnown RBP14.94□□□□□ -0.02
NPAS3-209ENST00000551008 PPFIA3O75145 1194 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 ARHGEF15O94989 841 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 SMIM10L2AP0DMW4 78 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 SMIM10L2BP0DMW5 78 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 MYOGP15173 224 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 SELPP16109 830 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 RFC2P35250 354 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 METAP2P50579 478 aaKnown RBP eCLIP14.94□□□□□ -0.02
NPAS3-209ENST00000551008 ADAM17P78536 824 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 PTK7Q13308 1070 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 BFSP2Q13515 415 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 PFKFB3Q16875 520 aaPredicted RBP14.94□□□□□ -0.02
NPAS3-209ENST00000551008 LRRC8DQ7L1W4 858 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 SERINC5Q86VE9 423 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 RPUSD2Q8IZ73 545 aaKnown RBP14.94□□□□□ -0.02
NPAS3-209ENST00000551008 ANO3Q9BYT9 981 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 ZNF576Q9H609 170 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 NOD1Q9Y239 953 aa14.94□□□□□ -0.02
NPAS3-209ENST00000551008 SPDYE3A6NKU9 549 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 hCG_1984214I3L0E3 225 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 EDIL3O43854 480 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 CXCL10P02778 98 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 SCG2P13521 617 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 PDIA3P30101 505 aaKnown RBP14.93□□□□□ -0.02
NPAS3-209ENST00000551008 SREBF1P36956 1147 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 ADCY7P51828 1080 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 SP4Q02446 784 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
NPAS3-209ENST00000551008 ZNF618Q5T7W0 954 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 NLRX1Q86UT6 975 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 ZNF713Q8N859 430 aaPredicted RBP14.93□□□□□ -0.02
NPAS3-209ENST00000551008 RETREG2Q8NC44 543 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 PHKBQ93100 1093 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 PCYT2Q99447 389 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 NKX2-4Q9H2Z4 354 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 RNPEPQ9H4A4 650 aa14.93□□□□□ -0.02
NPAS3-209ENST00000551008 NCOA5Q9HCD5 579 aaKnown RBP14.93□□□□□ -0.02
NPAS3-209ENST00000551008 PKD2L1Q9P0L9 805 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms