RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 PTPRSQ13332 1948 aa23.86■■□□□ 1.41
CACNB3-218ENST00000550771 FIBPO43427 364 aa23.86■■□□□ 1.41
CACNB3-218ENST00000550771 CAND2O75155 1236 aa23.86■■□□□ 1.41
CACNB3-218ENST00000550771 SMARCA1P28370 1054 aa23.86■■□□□ 1.41
CACNB3-218ENST00000550771 MKRN4PQ13434 485 aaPredicted RBP23.86■■□□□ 1.41
CACNB3-218ENST00000550771 HLA-CQ95604 372 aa23.86■■□□□ 1.41
CACNB3-218ENST00000550771 NECAB3Q96P71 396 aaPredicted RBP23.86■■□□□ 1.41
CACNB3-218ENST00000550771 TGS1Q96RS0 853 aaKnown RBP23.86■■□□□ 1.41
CACNB3-218ENST00000550771 MTA3Q9BTC8 594 aa23.86■■□□□ 1.41
CACNB3-218ENST00000550771 SUPT16HQ9Y5B9 1047 aaKnown RBP23.86■■□□□ 1.41
CACNB3-218ENST00000550771 NCOR1O75376 2440 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 LINC01553A4QN01 128 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 DDAH1O94760 285 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 SMIM10L2AP0DMW4 78 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 SMIM10L2BP0DMW5 78 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 KIF5BP33176 963 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 PLEKHG4Q58EX7 1191 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 XRRA1Q6P2D8 792 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 DBF4BQ8NFT6 615 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 BCAS3Q9H6U6 928 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 SUGCTQ9HAC7 445 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 INSL6Q9Y581 213 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 BAZ2BQ9UIF8 2168 aaKnown RBP23.85■■□□□ 1.41
CACNB3-218ENST00000550771 XIRP2A4UGR9 3374 aa23.85■■□□□ 1.41
CACNB3-218ENST00000550771 PIK3CDO00329 1044 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 AMHP03971 560 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 GNAT1P11488 350 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 COL9A1P20849 921 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 SEMA3FQ13275 785 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.84■■□□□ 1.41
CACNB3-218ENST00000550771 ZNF654Q8IZM8 581 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 CTCFLQ8NI51 663 aaPredicted RBP23.84■■□□□ 1.41
CACNB3-218ENST00000550771 GDPD5Q8WTR4 605 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 CUL5Q93034 780 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 RRP36Q96EU6 259 aaKnown RBP23.84■■□□□ 1.41
CACNB3-218ENST00000550771 GPR20Q99678 358 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 SENP7Q9BQF6 1050 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 LZTS2Q9BRK4 669 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 RNPEPQ9H4A4 650 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 LY9Q9HBG7 655 aa23.84■■□□□ 1.41
CACNB3-218ENST00000550771 TREHO43280 583 aa23.83■■□□□ 1.41
CACNB3-218ENST00000550771 PCNX4Q63HM2 1172 aa23.83■■□□□ 1.41
CACNB3-218ENST00000550771 CYFIP1Q7L576 1253 aa23.83■■□□□ 1.41
CACNB3-218ENST00000550771 SMARCC2Q8TAQ2 1214 aa23.83■■□□□ 1.41
CACNB3-218ENST00000550771 PIBF1Q8WXW3 757 aa23.83■■□□□ 1.41
CACNB3-218ENST00000550771 RTEL1Q9NZ71 1219 aa23.83■■□□□ 1.41
CACNB3-218ENST00000550771 RBM8AQ9Y5S9 174 aaKnown RBP23.83■■□□□ 1.41
CACNB3-218ENST00000550771 GNAQP50148 359 aa23.82■■□□□ 1.4
CACNB3-218ENST00000550771 FAM117BQ6P1L5 589 aa23.82■■□□□ 1.4
CACNB3-218ENST00000550771 CASC1Q6TDU7 716 aa23.82■■□□□ 1.4
CACNB3-218ENST00000550771 TMTC2Q8N394 836 aa23.82■■□□□ 1.4
CACNB3-218ENST00000550771 SEC63Q9UGP8 760 aaKnown RBP23.82■■□□□ 1.4
CACNB3-218ENST00000550771 ZNF215Q9UL58 517 aaPredicted RBP23.82■■□□□ 1.4
CACNB3-218ENST00000550771 MTUS1Q9ULD2 1270 aa23.82■■□□□ 1.4
CACNB3-218ENST00000550771 MEIS2O14770 477 aa23.81■■□□□ 1.4
CACNB3-218ENST00000550771 HTRA4P83105 476 aaPredicted RBP23.81■■□□□ 1.4
CACNB3-218ENST00000550771 USP17L6PQ6QN14 398 aa23.81■■□□□ 1.4
CACNB3-218ENST00000550771 MYOCDQ8IZQ8 938 aa23.81■■□□□ 1.4
CACNB3-218ENST00000550771 SEPT8Q92599 483 aa23.81■■□□□ 1.4
CACNB3-218ENST00000550771 TCF20Q9UGU0 1960 aaKnown RBP23.8■■□□□ 1.4
CACNB3-218ENST00000550771 TRANK1O15050 2925 aa23.8■■□□□ 1.4
CACNB3-218ENST00000550771 NLRX1Q86UT6 975 aa23.8■■□□□ 1.4
CACNB3-218ENST00000550771 GIMAP8Q8ND71 665 aaPredicted RBP23.8■■□□□ 1.4
CACNB3-218ENST00000550771 SP7Q8TDD2 431 aaPredicted RBP23.8■■□□□ 1.4
CACNB3-218ENST00000550771 MYL10Q9BUA6 226 aa23.8■■□□□ 1.4
CACNB3-218ENST00000550771 SETD4Q9NVD3 440 aa23.8■■□□□ 1.4
CACNB3-218ENST00000550771 MCM5P33992 734 aa23.79■■□□□ 1.4
CACNB3-218ENST00000550771 ADAM17P78536 824 aa23.79■■□□□ 1.4
CACNB3-218ENST00000550771 TRIM50Q86XT4 487 aa23.79■■□□□ 1.4
CACNB3-218ENST00000550771 TMEM87BQ96K49 555 aa23.79■■□□□ 1.4
CACNB3-218ENST00000550771 C1QTNF1Q9BXJ1 281 aa23.79■■□□□ 1.4
CACNB3-218ENST00000550771 COL4A4P53420 1690 aaPredicted RBP23.79■■□□□ 1.4
CACNB3-218ENST00000550771 REV3LO60673 3130 aa23.78■■□□□ 1.4
CACNB3-218ENST00000550771 PRC1O43663 620 aa23.78■■□□□ 1.4
CACNB3-218ENST00000550771 TOP1MTQ969P6 601 aa23.78■■□□□ 1.4
CACNB3-218ENST00000550771 CDHR1Q96JP9 859 aa23.78■■□□□ 1.4
CACNB3-218ENST00000550771 SH2B2O14492 632 aaPredicted RBP23.77■■□□□ 1.4
CACNB3-218ENST00000550771 CTSHP09668 335 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 CALM1P0DP23 149 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 CALM2P0DP24 149 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 CALM3P0DP25 149 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 FAM26DQ5JW98 314 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 UTP14CQ5TAP6 766 aaKnown RBP23.77■■□□□ 1.4
CACNB3-218ENST00000550771 NFXL1Q6ZNB6 911 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 SRBD1Q8N5C6 995 aaKnown RBP23.77■■□□□ 1.4
CACNB3-218ENST00000550771 FBXO22Q8NEZ5 403 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 LMBR1Q8WVP7 490 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 APBB2Q92870 758 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 GPRASP2Q96D09 838 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 SAMD11Q96NU1 681 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 C17orf80Q9BSJ5 609 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 PSTPIP2Q9H939 334 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 TELO2Q9Y4R8 837 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 NRCAMQ92823 1304 aa23.77■■□□□ 1.4
CACNB3-218ENST00000550771 CCDC69A6NI79 296 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 RBAK-RBAKDNI3L0D1 243 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 PLEKHA8P1O95397 391 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 LIFRP42702 1097 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 ARHGAP4P98171 946 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 RPAINQ86UA6 219 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms