RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PP2D1A8MPX8 630 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 ADCY3O60266 1144 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 PSMD10O75832 226 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 TXNP10599 105 aaKnown RBP11.6□□□□□ -0.55
RAB5C-207ENST00000550504 KCNA2P16389 499 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 UBA1P22314 1058 aaKnown RBP11.6□□□□□ -0.55
RAB5C-207ENST00000550504 PTGS1P23219 599 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 CDC25AP30304 524 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 ADCYAP1R1P41586 468 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
RAB5C-207ENST00000550504 SP2Q02086 613 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 SP4Q02446 784 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 TRIM32Q13049 653 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 NFKBIBQ15653 356 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 TMEM63BQ5T3F8 832 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 MFSD14CQ5VZR4 134 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 ADALQ6DHV7 355 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 NCAPH2Q6IBW4 605 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 SHC4Q6S5L8 630 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 SCFD2Q8WU76 684 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 RIT2Q99578 217 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 LRWD1Q9UFC0 647 aa11.6□□□□□ -0.55
RAB5C-207ENST00000550504 DDX41Q9UJV9 622 aaKnown RBP11.6□□□□□ -0.55
RAB5C-207ENST00000550504 MORC2Q9Y6X9 1032 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-207ENST00000550504 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-207ENST00000550504 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
RAB5C-207ENST00000550504 GGPS1O95749 300 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 TGFB3P10600 412 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
RAB5C-207ENST00000550504 UBE2HP62256 183 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 TTLL4Q14679 1199 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 GJC2Q5T442 439 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-207ENST00000550504 KCNV1Q6PIU1 500 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 USP49Q70CQ1 688 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 CYFIP1Q7L576 1253 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
RAB5C-207ENST00000550504 IGSF22Q8N9C0 903 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 FSIP1Q8NA03 581 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 COPS5Q92905 334 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 EPSTI1Q96J88 318 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 UNC45AQ9H3U1 944 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 TCEAL9Q9UHQ7 104 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 DOCK5Q9H7D0 1870 aa11.59□□□□□ -0.55
RAB5C-207ENST00000550504 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 A0A1W2PQ27 194 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 A0A1W2PQ64 194 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 A0A1W2PQD8 194 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 RBM47A0AV96 593 aaKnown RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 EML1O00423 815 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 IGHA2P01877 340 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 ZNF865P0CJ78 1059 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 PRMT2P55345 433 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 SPIRE1Q08AE8 756 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 NEDD9Q14511 834 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 PDIA5Q14554 519 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 RESP18Q5W5W9 173 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 CCDC62Q6P9F0 684 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 MIER3Q7Z3K6 550 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 TRPV1Q8NER1 839 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 MRPS27Q92552 414 aaKnown RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 SENP7Q9BQF6 1050 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 PANK2Q9BZ23 570 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 GOLPH3LQ9H4A5 285 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 MLXIPQ9HAP2 919 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 JPH1Q9HDC5 661 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-207ENST00000550504 FAM13BQ9NYF5 915 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 SLC9A2Q9UBY0 812 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 TELO2Q9Y4R8 837 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 SAMM50Q9Y512 469 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 NFASCO94856 1347 aa11.58□□□□□ -0.56
RAB5C-207ENST00000550504 FARP2O94887 1054 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CCNE2O96020 404 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 HMGCRP04035 888 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CYBAP13498 195 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 PFKFB1P16118 471 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 SMPD1P17405 629 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CMA1P23946 247 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CNGA1P29973 690 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 TXLNAP40222 546 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 UBA7P41226 1012 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 KRT76Q01546 638 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 TNFAIP2Q03169 654 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CELF3Q5SZQ8 465 aaKnown RBP11.57□□□□□ -0.56
RAB5C-207ENST00000550504 IQSEC1Q6DN90 963 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
RAB5C-207ENST00000550504 CABP7Q86V35 215 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms