RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 GJD2Q9UKL4 321 aa15.92■□□□□ 0.14
CACNB3-216ENST00000550391 PCDHA12Q9UN75 941 aa15.92■□□□□ 0.14
CACNB3-216ENST00000550391 FAM237AA0A1B0GTK4 181 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 SOX1O00570 391 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-216ENST00000550391 MAFGO15525 162 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 HOXC6P09630 235 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 PSMC4P43686 418 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 PDIA5Q14554 519 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 KLHL40Q2TBA0 621 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 GNPTABQ3T906 1256 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 SPECC1Q5M775 1068 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 MAMDC4Q6UXC1 1216 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 IGSF22Q8N9C0 903 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 SOCS4Q8WXH5 440 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 LRCH3Q96II8 777 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 MAML3Q96JK9 1138 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 CDHR1Q96JP9 859 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 ZNF577Q9BSK1 485 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 ARHGAP39Q9C0H5 1083 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 GOLPH3LQ9H4A5 285 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 AGO4Q9HCK5 861 aaKnown RBP15.91■□□□□ 0.14
CACNB3-216ENST00000550391 KIAA1217Q5T5P2 1943 aa15.91■□□□□ 0.14
CACNB3-216ENST00000550391 SPATA31C2B4DYI2 1134 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 PSMD10O75832 226 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 ICAM3P32942 547 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 CAP1Q01518 475 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 SEMA3FQ13275 785 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 ARMCX2Q7L311 632 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 TRIM47Q96LD4 638 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 UIMC1Q96RL1 719 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 RIT2Q99578 217 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 HPSEQ9Y251 543 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 DOCK3Q8IZD9 2030 aa15.9■□□□□ 0.14
CACNB3-216ENST00000550391 A0A1B0GVL5 298 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 IPO5O00410 1097 aaKnown RBP15.89■□□□□ 0.13
CACNB3-216ENST00000550391 PFKFB1P16118 471 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 LIG1P18858 919 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 TXLNAP40222 546 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 RGS2P41220 211 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 FAM160A1Q05DH4 1040 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 SPIRE1Q08AE8 756 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-216ENST00000550391 KIF22Q14807 665 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 LRCH2Q5VUJ6 765 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.89■□□□□ 0.13
CACNB3-216ENST00000550391 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
CACNB3-216ENST00000550391 DEFB123Q8N688 67 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 SYMPKQ92797 1274 aaKnown RBP15.89■□□□□ 0.13
CACNB3-216ENST00000550391 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
CACNB3-216ENST00000550391 MCM3APO60318 1980 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 POTEMA6NI47 508 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
CACNB3-216ENST00000550391 GAS7O60861 476 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 ATP9AO75110 1047 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 UBA7P41226 1012 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 SYKP43405 635 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 NDUFA8P51970 172 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 B3GNT9Q6UX72 402 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 SEPT14Q6ZU15 432 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 FMR1NBQ8N0W7 255 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-216ENST00000550391 ENGASEQ8NFI3 743 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 APBA2Q99767 749 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 TEKT3Q9BXF9 490 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 CCSER1Q9C0I3 900 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 LRWD1Q9UFC0 647 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 KCNH3Q9ULD8 1083 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 VCANP13611 3396 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 SYNGAP1Q96PV0 1343 aa15.88■□□□□ 0.13
CACNB3-216ENST00000550391 PP2D1A8MPX8 630 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-216ENST00000550391 IGHA2P01877 340 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 KCNA2P16389 499 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 CYP2B6P20813 491 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 CDC25AP30304 524 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 PPP2R5CQ13362 524 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 SNW1Q13573 536 aaKnown RBP15.87■□□□□ 0.13
CACNB3-216ENST00000550391 OLFML2BQ68BL8 750 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 KCNV1Q6PIU1 500 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 PYM1Q9BRP8 204 aaKnown RBP15.87■□□□□ 0.13
CACNB3-216ENST00000550391 KATNBL1Q9H079 304 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 VTA1Q9NP79 307 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-216ENST00000550391 DACT1Q9NYF0 836 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 PKD2L1Q9P0L9 805 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 PTCH2Q9Y6C5 1203 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 NFASCO94856 1347 aa15.87■□□□□ 0.13
CACNB3-216ENST00000550391 SLC26A4O43511 780 aa15.86■□□□□ 0.13
CACNB3-216ENST00000550391 NR1I2O75469 434 aa15.86■□□□□ 0.13
CACNB3-216ENST00000550391 ZNF202O95125 648 aa15.86■□□□□ 0.13
CACNB3-216ENST00000550391 TGFB3P10600 412 aa15.86■□□□□ 0.13
CACNB3-216ENST00000550391 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
CACNB3-216ENST00000550391 SP2Q02086 613 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms