RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
TCHP-208ENST00000549550 ZNF318Q5VUA4 2279 aa18■□□□□ 0.47
TCHP-208ENST00000549550 H3BNC9 293 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 OPLAHO14841 1288 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 KDM4AO75164 1064 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 UPP2O95045 317 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 GGPS1O95749 300 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 HSD17B4P51659 736 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 GPM6BQ13491 265 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 TCEAL5Q5H9L2 206 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 CELF3Q5SZQ8 465 aaKnown RBP17.99■□□□□ 0.47
TCHP-208ENST00000549550 ATP6V0A1Q93050 837 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 PABPC5Q96DU9 382 aaKnown RBP17.99■□□□□ 0.47
TCHP-208ENST00000549550 PDCD2LQ9BRP1 358 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 C16orf70Q9BSU1 422 aa17.99■□□□□ 0.47
TCHP-208ENST00000549550 POTEB3A0JP26 581 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 ZNF213O14771 459 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 PARP1P09874 1014 aaKnown RBP17.98■□□□□ 0.47
TCHP-208ENST00000549550 MRE11P49959 708 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 ZP2Q05996 745 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 CCDC178Q5BJE1 867 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 KCNV1Q6PIU1 500 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 POTEBQ6S5H4 581 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 TMEM192Q8IY95 271 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 SEPT8Q92599 483 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 ANKS1AQ92625 1134 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 TOP1MTQ969P6 601 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 OSBPL7Q9BZF2 842 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 FAM50BQ9Y247 325 aa17.98■□□□□ 0.47
TCHP-208ENST00000549550 C17orf102A2RUQ5 167 aa17.97■□□□□ 0.47
TCHP-208ENST00000549550 HIP1O00291 1037 aa17.97■□□□□ 0.47
TCHP-208ENST00000549550 UBA1P22314 1058 aaKnown RBP17.97■□□□□ 0.47
TCHP-208ENST00000549550 SP2Q02086 613 aa17.97■□□□□ 0.47
TCHP-208ENST00000549550 COL19A1Q14993 1142 aa17.97■□□□□ 0.47
TCHP-208ENST00000549550 ENAHQ8N8S7 591 aaPredicted RBP17.97■□□□□ 0.47
TCHP-208ENST00000549550 ZSCAN10Q96SZ4 725 aaPredicted RBP17.97■□□□□ 0.47
TCHP-208ENST00000549550 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
TCHP-208ENST00000549550 NSUN3Q9H649 340 aaKnown RBP17.97■□□□□ 0.47
TCHP-208ENST00000549550 PRKAG3Q9UGI9 489 aa17.97■□□□□ 0.47
TCHP-208ENST00000549550 BAZ2BQ9UIF8 2168 aaKnown RBP17.97■□□□□ 0.47
TCHP-208ENST00000549550 TRIM6-TRIM34B2RNG4 842 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 B4E1Z4 1266 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 H3BRB1 525 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 TREHO43280 583 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 REC8O95072 547 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 CTSHP09668 335 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 SMIM10L2AP0DMW4 78 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 SMIM10L2BP0DMW5 78 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 HOXC8P31273 242 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
TCHP-208ENST00000549550 NHLH1Q02575 133 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 GHRHRQ02643 423 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 PGM5Q15124 567 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 STOX1Q6ZVD7 989 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 IL31RAQ8NI17 732 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 TUT1Q9H6E5 874 aaKnown RBP17.96■□□□□ 0.47
TCHP-208ENST00000549550 MLXIPQ9HAP2 919 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 CLDND1Q9NY35 253 aa17.96■□□□□ 0.47
TCHP-208ENST00000549550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
TCHP-208ENST00000549550 C19orf67A6NJJ6 358 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 PPP1R11O60927 126 aaPredicted RBP17.95■□□□□ 0.46
TCHP-208ENST00000549550 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
TCHP-208ENST00000549550 NT5C2P49902 561 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 VSIG10LQ86VR7 867 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 ADHFE1Q8IWW8 467 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 STAG2Q8N3U4 1231 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
TCHP-208ENST00000549550 RILPL2Q969X0 211 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 ZFP91Q96JP5 570 aaPredicted RBP17.95■□□□□ 0.46
TCHP-208ENST00000549550 FBXL18Q96ME1 805 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 IFIH1Q9BYX4 1025 aaKnown RBP17.95■□□□□ 0.46
TCHP-208ENST00000549550 ZSWIM5Q9P217 1185 aa17.95■□□□□ 0.46
TCHP-208ENST00000549550 KIAA1671Q9BY89 1806 aa17.94■□□□□ 0.46
TCHP-208ENST00000549550 CAND2O75155 1236 aa17.94■□□□□ 0.46
TCHP-208ENST00000549550 LGALS2P05162 132 aa17.94■□□□□ 0.46
TCHP-208ENST00000549550 TGFB3P10600 412 aa17.94■□□□□ 0.46
TCHP-208ENST00000549550 KCNH6Q9H252 994 aa17.94■□□□□ 0.46
TCHP-208ENST00000549550 RNPEPQ9H4A4 650 aa17.94■□□□□ 0.46
TCHP-208ENST00000549550 MAP3K20Q9NYL2 800 aaKnown RBP17.94■□□□□ 0.46
TCHP-208ENST00000549550 CCND2P30279 289 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 CTNNB1P35222 781 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 IRS1P35568 1242 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 LTBRP36941 435 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 HFE2Q6ZVN8 426 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 RPAINQ86UA6 219 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 RUFY2Q8WXA3 655 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 BCAS3Q9H6U6 928 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
TCHP-208ENST00000549550 KLRF2D3W0D1 207 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 NOP56O00567 594 aaKnown RBP17.92■□□□□ 0.46
TCHP-208ENST00000549550 ZBTB5O15062 677 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
TCHP-208ENST00000549550 FIBCD1Q8N539 461 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 APBB2Q92870 758 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 MTMR8Q96EF0 704 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 UBAC1Q9BSL1 405 aa17.92■□□□□ 0.46
TCHP-208ENST00000549550 UPF3BQ9BZI7 483 aaKnown RBP17.92■□□□□ 0.46
TCHP-208ENST00000549550 SETD4Q9NVD3 440 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms