RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GDF6Q6KF10 455 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 LAPTM4BQ86VI4 370 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 RAB11FIP4Q86YS3 637 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 ZNF654Q8IZM8 581 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 CMTR1Q8N1G2 835 aaKnown RBP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 TMTC2Q8N394 836 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 CCDC82Q8N4S0 544 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 SAMD3Q8N6K7 520 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 C7orf31Q8N865 590 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 IL31RAQ8NI17 732 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 PPM1EQ8WY54 764 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 KAT2BQ92831 832 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 VWCEQ96DN2 955 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 RRP36Q96EU6 259 aaKnown RBP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 ZFRQ96KR1 1074 aaKnown RBP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 LRRC2Q9BYS8 371 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 NKX2-4Q9H2Z4 354 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 MLXIPQ9HAP2 919 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 SLC28A3Q9HAS3 691 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 LY9Q9HBG7 655 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 RTEL1Q9NZ71 1219 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 PLXNA1Q9UIW2 1896 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 hCG_1642624A0A1W2PR95 340 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 PPFIA4O75335 1185 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 GGPS1O95749 300 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 ZNF286BP0CG31 522 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 ACTN1P12814 892 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 MYOGP15173 224 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 ATP2A2P16615 1042 aaKnown RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 RXRAP19793 462 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 IGFBP4P22692 258 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 GNAQP50148 359 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 SP2Q02086 613 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 GHRHRQ02643 423 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 NECTIN1Q15223 517 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 RAB30Q15771 203 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 TSR1Q2NL82 804 aaKnown RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 HSDL1Q3SXM5 330 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 CELF3Q5SZQ8 465 aaKnown RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 MYSM1Q5VVJ2 828 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 CREB3L3Q68CJ9 461 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 KCNV1Q6PIU1 500 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 USP17L6PQ6QN14 398 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 SRBD1Q8N5C6 995 aaKnown RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 PPTC7Q8NI37 304 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 SMARCC2Q8TAQ2 1214 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 EMID1Q96A84 441 aaPredicted RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 TMEM87BQ96K49 555 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 SPATA33Q96N06 139 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 MAP3K14Q99558 947 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 LZTS2Q9BRK4 669 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 PRDM12Q9H4Q4 367 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 BCAS3Q9H6U6 928 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 HDAC6Q9UBN7 1215 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 YBX2Q9Y2T7 364 aaKnown RBP7.74□□□□□ -1.17
SCAF11-211ENST00000547950 SLC12A7Q9Y666 1083 aa7.74□□□□□ -1.17
SCAF11-211ENST00000547950 GRXCR2A6NFK2 248 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 RBAK-RBAKDNI3L0D1 243 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 SH2B2O14492 632 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-211ENST00000547950 DDAH1O94760 285 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 PLEKHA8P1O95397 391 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 PFKMP08237 780 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CALM1P0DP23 149 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CALM2P0DP24 149 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CALM3P0DP25 149 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 TGFB3P10600 412 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 RFC2P35250 354 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 MRPS9P82933 396 aaKnown RBP7.73□□□□□ -1.17
SCAF11-211ENST00000547950 ZNF200P98182 395 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CCDC85BQ15834 202 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-211ENST00000547950 KIAA0753Q2KHM9 967 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 SYNE3Q6ZMZ3 975 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CENPQQ7L2Z9 268 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-211ENST00000547950 SESTD1Q86VW0 696 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CCDC155Q8N6L0 562 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 FANCBQ8NB91 859 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 CUL5Q93034 780 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 GAS2L1Q99501 681 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-211ENST00000547950 MTA3Q9BTC8 594 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 KATNAL1Q9BW62 490 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 SPZ1Q9BXG8 430 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 PSTPIP2Q9H939 334 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 GTF2IRD1Q9UHL9 959 aa7.73□□□□□ -1.17
SCAF11-211ENST00000547950 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 HAS3O00219 553 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 NOP56O00567 594 aaKnown RBP7.72□□□□□ -1.17
SCAF11-211ENST00000547950 MEIS2O14770 477 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 F2P00734 622 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 CKBP12277 381 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 SELPP16109 830 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 UBA1P22314 1058 aaKnown RBP7.72□□□□□ -1.17
SCAF11-211ENST00000547950 SMARCA1P28370 1054 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 LIFRP42702 1097 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 SP4Q02446 784 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 GNPTABQ3T906 1256 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 BMP2KLQ5H9B9 411 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
SCAF11-211ENST00000547950 PPP2R2DQ66LE6 453 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms