RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 SMIM10L2BP0DMW5 78 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 PDE4AP27815 886 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 SMARCA1P28370 1054 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 GNAQP50148 359 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 TRAF7Q6Q0C0 670 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 GIMAP8Q8ND71 665 aaPredicted RBP26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 DBF4BQ8NFT6 615 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 PIBF1Q8WXW3 757 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 SEPT8Q92599 483 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 ZFP91Q96JP5 570 aaPredicted RBP26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 INPP4AQ96PE3 977 aaPredicted RBP26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 MTUS1Q9ULD2 1270 aa26.62■■□□□ 1.85
SMARCD1-204ENST00000547637 CHD7Q9P2D1 2997 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 CYFIP1Q7L576 1253 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 MYOCDQ8IZQ8 938 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 GDPD5Q8WTR4 605 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 MTA3Q9BTC8 594 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 RNPEPQ9H4A4 650 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 RTEL1Q9NZ71 1219 aa26.61■■□□□ 1.85
SMARCD1-204ENST00000547637 LINC01553A4QN01 128 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 SPATA31C2B4DYI2 1134 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 SGSM2O43147 1006 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 LPXNO60711 386 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 DDAH1O94760 285 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 GPKOWQ92917 476 aaPredicted RBP eCLIP26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 WNT8BQ93098 351 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 SPZ1Q9BXG8 430 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 SUGCTQ9HAC7 445 aa26.6■■□□□ 1.85
SMARCD1-204ENST00000547637 PTPRSQ13332 1948 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 MRPS9P82933 396 aaKnown RBP26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 MBTPS1Q14703 1052 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 PLEKHG4Q58EX7 1191 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 NFXL1Q6ZNB6 911 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 IGDCC4Q8TDY8 1250 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 MAP4K1Q92918 833 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 CDHR1Q96JP9 859 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 SAMD11Q96NU1 681 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 NECAB3Q96P71 396 aaPredicted RBP26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 SENP7Q9BQF6 1050 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 SENP2Q9HC62 589 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 SUPT16HQ9Y5B9 1047 aaKnown RBP26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 FRMPD4Q14CM0 1322 aa26.59■■□□□ 1.85
SMARCD1-204ENST00000547637 TREHO43280 583 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 SLC35G1Q2M3R5 365 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 PCNX4Q63HM2 1172 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 ZNF654Q8IZM8 581 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 FBXO22Q8NEZ5 403 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 GPR20Q99678 358 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 KAT6AQ92794 2004 aa26.58■■□□□ 1.85
SMARCD1-204ENST00000547637 CCDC69A6NI79 296 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 PIK3CDO00329 1044 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 CALM1P0DP23 149 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 CALM2P0DP24 149 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 CALM3P0DP25 149 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 HOXC8P31273 242 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 HIC1Q14526 733 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 PTPROQ16827 1216 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 TCTN1Q2MV58 587 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 APBB2Q92870 758 aa26.57■■□□□ 1.84
SMARCD1-204ENST00000547637 MCM5P33992 734 aa26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 UTP14CQ5TAP6 766 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 SPRED2Q7Z698 418 aa26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 MB21D2Q8IYB1 491 aaPredicted RBP26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 TMEM87BQ96K49 555 aa26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 YME1L1Q96TA2 773 aa26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 SETD4Q9NVD3 440 aa26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 RBM8AQ9Y5S9 174 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-204ENST00000547637 HTRA4P83105 476 aaPredicted RBP26.55■■□□□ 1.84
SMARCD1-204ENST00000547637 RSPH3Q86UC2 560 aa26.55■■□□□ 1.84
SMARCD1-204ENST00000547637 NRCAMQ92823 1304 aa26.55■■□□□ 1.84
SMARCD1-204ENST00000547637 CTSHP09668 335 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 ANTXR2P58335 489 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 ARHGAP4P98171 946 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 USP17L6PQ6QN14 398 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 TOP1MTQ969P6 601 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 BCAS3Q9H6U6 928 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 PSTPIP2Q9H939 334 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 LY9Q9HBG7 655 aa26.54■■□□□ 1.84
SMARCD1-204ENST00000547637 MICAL3Q7RTP6 2002 aa26.53■■□□□ 1.84
SMARCD1-204ENST00000547637 PRC1O43663 620 aa26.53■■□□□ 1.84
SMARCD1-204ENST00000547637 SP4Q02446 784 aa26.53■■□□□ 1.84
SMARCD1-204ENST00000547637 GPRASP2Q96D09 838 aa26.53■■□□□ 1.84
SMARCD1-204ENST00000547637 SIP14410 1827 aa26.53■■□□□ 1.84
SMARCD1-204ENST00000547637 MUC3AQ02505 3323 aa26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 UPP2O95045 317 aa26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 SEMA3FQ13275 785 aa26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 TAF2Q6P1X5 1199 aa26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 SP7Q8TDD2 431 aaPredicted RBP26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 TNPO1Q92973 898 aaKnown RBP26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 MYL10Q9BUA6 226 aa26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 EHMT1Q9H9B1 1298 aa26.52■■□□□ 1.84
SMARCD1-204ENST00000547637 COL4A4P53420 1690 aaPredicted RBP26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 SPDYE3A6NKU9 549 aa26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 MEIS2O14770 477 aa26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 MAFGO15525 162 aa26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 SEPT1Q8WYJ6 367 aa26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 C17orf80Q9BSJ5 609 aa26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 IFIH1Q9BYX4 1025 aaKnown RBP26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 UBE2ZQ9H832 354 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms