RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 GUCY1A3Q02108 690 aa8.63□□□□□ -1.03
CPNE8-204ENST00000546603 SMAD4Q13485 552 aaKnown RBP8.63□□□□□ -1.03
CPNE8-204ENST00000546603 HABP4Q5JVS0 413 aaKnown RBP8.63□□□□□ -1.03
CPNE8-204ENST00000546603 TEPPQ6URK8 271 aa8.63□□□□□ -1.03
CPNE8-204ENST00000546603 TTLL11Q8NHH1 800 aa8.63□□□□□ -1.03
CPNE8-204ENST00000546603 UHMK1Q8TAS1 419 aaKnown RBP8.63□□□□□ -1.03
CPNE8-204ENST00000546603 SPATA6Q9NWH7 488 aaPredicted RBP8.63□□□□□ -1.03
CPNE8-204ENST00000546603 APPP05067 770 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 HOXA5P20719 270 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
CPNE8-204ENST00000546603 ITGA1P56199 1179 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 ADGRG2Q8IZP9 1017 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 CARFQ8N187 725 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
CPNE8-204ENST00000546603 HSPBP1Q9NZL4 362 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 DSEQ9UL01 958 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 PCDHA8Q9Y5H6 950 aa8.62□□□□□ -1.03
CPNE8-204ENST00000546603 A0A1B0GTL3 188 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 WNT9AO14904 365 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 EFCAB14O75071 495 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 LRG1P02750 347 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 THBS2P35442 1172 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 BMS1Q14692 1282 aaKnown RBP8.61□□□□□ -1.03
CPNE8-204ENST00000546603 C2orf27AQ580R0 203 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 CLEC4DQ8WXI8 215 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 SYT3Q9BQG1 590 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 XYLT2Q9H1B5 865 aa8.61□□□□□ -1.03
CPNE8-204ENST00000546603 ARVCFO00192 962 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 GSTA4O15217 222 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 NKRFO15226 690 aaKnown RBP eCLIP8.6□□□□□ -1.03
CPNE8-204ENST00000546603 RPL13P26373 211 aaKnown RBP8.6□□□□□ -1.03
CPNE8-204ENST00000546603 TUSC3Q13454 348 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 STK32CQ86UX6 486 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 PCDH19Q8TAB3 1148 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 FEZF2Q8TBJ5 459 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 FBXW5Q969U6 566 aa8.6□□□□□ -1.03
CPNE8-204ENST00000546603 KRTAP4-8A0A0G2JLE6 195 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 OTOL1A6NHN0 477 aaPredicted RBP8.59□□□□□ -1.03
CPNE8-204ENST00000546603 LILRA6Q6PI73 481 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.59□□□□□ -1.03
CPNE8-204ENST00000546603 TMEM209Q96SK2 561 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 SPATA25Q9BR10 227 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 ZSWIM4Q9H7M6 989 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 NDOR1Q9UHB4 597 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 PCDHA9Q9Y5H5 950 aa8.59□□□□□ -1.03
CPNE8-204ENST00000546603 CRTAMO95727 393 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 EPHA5P54756 1037 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 CTSWP56202 376 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 ST5P78524 1137 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 GRIN1Q05586 938 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 C16orf59Q7L2K0 433 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 ZC3H7AQ8IWR0 971 aaKnown RBP8.58□□□□□ -1.04
CPNE8-204ENST00000546603 RBM12BQ8IXT5 1001 aaKnown RBP8.58□□□□□ -1.04
CPNE8-204ENST00000546603 CLIC6Q96NY7 704 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 CATSPERZQ9NTU4 200 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 PTCH2Q9Y6C5 1203 aa8.58□□□□□ -1.04
CPNE8-204ENST00000546603 CYP7B1O75881 506 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 ADAM9Q13443 819 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 GPR19Q15760 415 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 PAN2Q504Q3 1202 aaKnown RBP8.57□□□□□ -1.04
CPNE8-204ENST00000546603 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 FAM47CQ5HY64 1035 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 KCTD1Q719H9 257 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 FRMD5Q7Z6J6 570 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 ZDHHC14Q8IZN3 488 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 NLGN4XQ8N0W4 816 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 GSTCDQ8NEC7 633 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 MAGEB10Q96LZ2 347 aaPredicted RBP8.57□□□□□ -1.04
CPNE8-204ENST00000546603 WRNIP1Q96S55 665 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 MRPL4Q9BYD3 311 aaKnown RBP8.57□□□□□ -1.04
CPNE8-204ENST00000546603 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
CPNE8-204ENST00000546603 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.56□□□□□ -1.04
CPNE8-204ENST00000546603 SRGAP2CP0DJJ0 459 aa8.56□□□□□ -1.04
CPNE8-204ENST00000546603 FAHP16930 419 aa8.56□□□□□ -1.04
CPNE8-204ENST00000546603 ARHGAP36Q6ZRI8 547 aa8.56□□□□□ -1.04
CPNE8-204ENST00000546603 C20orf173Q96LM9 149 aa8.56□□□□□ -1.04
CPNE8-204ENST00000546603 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
CPNE8-204ENST00000546603 SFMBT1Q9UHJ3 866 aa8.56□□□□□ -1.04
CPNE8-204ENST00000546603 A0A0G2JLL6 359 aaPredicted RBP8.55□□□□□ -1.04
CPNE8-204ENST00000546603 KCNQ2O43526 872 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 LTFP02788 710 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 PYGMP11217 842 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 GJA9P57773 515 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 CRY1Q16526 586 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 PRR31Q5SQ13 230 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 NT5DC1Q5TFE4 455 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 VASNQ6EMK4 673 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 EP400NLQ6ZTU2 488 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 ZNF761Q86XN6 746 aaPredicted RBP8.55□□□□□ -1.04
CPNE8-204ENST00000546603 ADAMTS17Q8TE56 1095 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 RTEL1Q9NZ71 1219 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 TELO2Q9Y4R8 837 aa8.55□□□□□ -1.04
CPNE8-204ENST00000546603 TCRBV5S4A2TA0A5A2 114 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 NOBOXO60393 691 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 PDE6AP16499 860 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms