RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 AEBP2Q6ZN18 517 aaPredicted RBP33.34■■■□□ 2.93
CPNE8-204ENST00000546603 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
CPNE8-204ENST00000546603 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
CPNE8-204ENST00000546603 SENP3Q9H4L4 574 aaPredicted RBP28.41■■■□□ 2.14
CPNE8-204ENST00000546603 FOXD1Q16676 465 aa26.34■■□□□ 1.81
CPNE8-204ENST00000546603 PLPPR3Q6T4P5 718 aa26.32■■□□□ 1.8
CPNE8-204ENST00000546603 PPP6R1Q9UPN7 881 aa25.19■■□□□ 1.62
CPNE8-204ENST00000546603 ADRA2BP18089 450 aa25.16■■□□□ 1.62
CPNE8-204ENST00000546603 PIAS4Q8N2W9 510 aaPredicted RBP24.81■■□□□ 1.56
CPNE8-204ENST00000546603 MSH5O43196 834 aa24.42■■□□□ 1.5
CPNE8-204ENST00000546603 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
CPNE8-204ENST00000546603 PPP4R3CPQ6ZMV5 832 aa23.14■■□□□ 1.29
CPNE8-204ENST00000546603 MAPK8IP2Q13387 824 aaPredicted RBP22.87■■□□□ 1.25
CPNE8-204ENST00000546603 DMRT2Q9Y5R5 561 aa22.63■■□□□ 1.21
CPNE8-204ENST00000546603 CNKSR2Q8WXI2 1034 aa22.56■■□□□ 1.2
CPNE8-204ENST00000546603 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
CPNE8-204ENST00000546603 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
CPNE8-204ENST00000546603 KCNA4P22459 653 aa22.38■■□□□ 1.17
CPNE8-204ENST00000546603 RNF216Q9NWF9 866 aaPredicted RBP22.16■■□□□ 1.14
CPNE8-204ENST00000546603 NPM3O75607 178 aaKnown RBP22.14■■□□□ 1.13
CPNE8-204ENST00000546603 HOXD11P31277 338 aaPredicted RBP22.1■■□□□ 1.13
CPNE8-204ENST00000546603 DCAF8L1A6NGE4 600 aa21.66■■□□□ 1.06
CPNE8-204ENST00000546603 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
CPNE8-204ENST00000546603 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
CPNE8-204ENST00000546603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.97
CPNE8-204ENST00000546603 SLC4A2P04920 1241 aa20.94■□□□□ 0.94
CPNE8-204ENST00000546603 RNF39Q9H2S5 420 aa20.87■□□□□ 0.93
CPNE8-204ENST00000546603 FOXD4L1Q9NU39 408 aa20.69■□□□□ 0.9
CPNE8-204ENST00000546603 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
CPNE8-204ENST00000546603 C1QBPQ07021 282 aaKnown RBP20.65■□□□□ 0.9
CPNE8-204ENST00000546603 ZBTB22O15209 634 aa20.55■□□□□ 0.88
CPNE8-204ENST00000546603 MYCNP04198 464 aaPredicted RBP20.5■□□□□ 0.87
CPNE8-204ENST00000546603 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
CPNE8-204ENST00000546603 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
CPNE8-204ENST00000546603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
CPNE8-204ENST00000546603 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
CPNE8-204ENST00000546603 SAMD1Q6SPF0 538 aaPredicted RBP20.35■□□□□ 0.85
CPNE8-204ENST00000546603 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.85
CPNE8-204ENST00000546603 APLP2Q06481 763 aa20.3■□□□□ 0.84
CPNE8-204ENST00000546603 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
CPNE8-204ENST00000546603 CAPN15O75808 1086 aa20.11■□□□□ 0.81
CPNE8-204ENST00000546603 ATXN8OSP0DMR3 200 aa20.02■□□□□ 0.8
CPNE8-204ENST00000546603 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
CPNE8-204ENST00000546603 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
CPNE8-204ENST00000546603 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
CPNE8-204ENST00000546603 DSG3P32926 999 aa19.79■□□□□ 0.76
CPNE8-204ENST00000546603 ABCB7O75027 752 aa19.67■□□□□ 0.74
CPNE8-204ENST00000546603 POLA2Q14181 598 aa19.61■□□□□ 0.73
CPNE8-204ENST00000546603 ZBTB12Q9Y330 459 aaPredicted RBP19.33■□□□□ 0.68
CPNE8-204ENST00000546603 FBLN2P98095 1184 aa19.17■□□□□ 0.66
CPNE8-204ENST00000546603 MKRN4PQ13434 485 aaPredicted RBP19.03■□□□□ 0.64
CPNE8-204ENST00000546603 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
CPNE8-204ENST00000546603 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
CPNE8-204ENST00000546603 SPDYE2BA6NHP3 402 aa18.77■□□□□ 0.6
CPNE8-204ENST00000546603 SPDYE6P0CI01 402 aa18.77■□□□□ 0.6
CPNE8-204ENST00000546603 SPDYE2Q495Y8 402 aa18.77■□□□□ 0.6
CPNE8-204ENST00000546603 ZNF692Q9BU19 519 aaPredicted RBP18.66■□□□□ 0.58
CPNE8-204ENST00000546603 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
CPNE8-204ENST00000546603 SPDYE4A6NLX3 237 aa18.57■□□□□ 0.56
CPNE8-204ENST00000546603 SSUH2Q9Y2M2 353 aa18.57■□□□□ 0.56
CPNE8-204ENST00000546603 REM2Q8IYK8 340 aaPredicted RBP18.43■□□□□ 0.54
CPNE8-204ENST00000546603 FKBP8Q14318 412 aa18.4■□□□□ 0.54
CPNE8-204ENST00000546603 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
CPNE8-204ENST00000546603 SPDYE1Q8NFV5 336 aaPredicted RBP18.26■□□□□ 0.51
CPNE8-204ENST00000546603 PROM2Q8N271 834 aa18.23■□□□□ 0.51
CPNE8-204ENST00000546603 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
CPNE8-204ENST00000546603 CHRDL2Q6WN34 429 aa18.17■□□□□ 0.5
CPNE8-204ENST00000546603 CLEC11AQ9Y240 323 aa18.16■□□□□ 0.5
CPNE8-204ENST00000546603 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
CPNE8-204ENST00000546603 PRR29P0C7W0 189 aa18■□□□□ 0.47
CPNE8-204ENST00000546603 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
CPNE8-204ENST00000546603 PIP4P2Q8N4L2 257 aa17.88■□□□□ 0.45
CPNE8-204ENST00000546603 FBXO3Q9UK99 471 aa17.88■□□□□ 0.45
CPNE8-204ENST00000546603 POTEHQ6S545 545 aa17.78■□□□□ 0.44
CPNE8-204ENST00000546603 PRKAR2AP13861 404 aaKnown RBP17.76■□□□□ 0.43
CPNE8-204ENST00000546603 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
CPNE8-204ENST00000546603 CREBZFQ9NS37 354 aa17.68■□□□□ 0.42
CPNE8-204ENST00000546603 MIER1Q8N108 512 aa17.65■□□□□ 0.42
CPNE8-204ENST00000546603 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
CPNE8-204ENST00000546603 PLCD3Q8N3E9 789 aa17.61■□□□□ 0.41
CPNE8-204ENST00000546603 VASPP50552 380 aaPredicted RBP17.58■□□□□ 0.4
CPNE8-204ENST00000546603 FARP1Q9Y4F1 1045 aaPredicted RBP17.56■□□□□ 0.4
CPNE8-204ENST00000546603 ZBTB47Q9UFB7 747 aaPredicted RBP17.47■□□□□ 0.39
CPNE8-204ENST00000546603 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
CPNE8-204ENST00000546603 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
CPNE8-204ENST00000546603 HAX1O00165 279 aa17.39■□□□□ 0.37
CPNE8-204ENST00000546603 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
CPNE8-204ENST00000546603 C19orf67A6NJJ6 358 aa17.31■□□□□ 0.36
CPNE8-204ENST00000546603 IFNLR1Q8IU57 520 aaPredicted RBP17.3■□□□□ 0.36
CPNE8-204ENST00000546603 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
CPNE8-204ENST00000546603 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
CPNE8-204ENST00000546603 NUBP1P53384 320 aa17.18■□□□□ 0.34
CPNE8-204ENST00000546603 SPOCK2Q92563 424 aa17.17■□□□□ 0.34
CPNE8-204ENST00000546603 EVX2Q03828 476 aa17.15■□□□□ 0.34
CPNE8-204ENST00000546603 RASEFQ8IZ41 740 aa17.14■□□□□ 0.33
CPNE8-204ENST00000546603 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
CPNE8-204ENST00000546603 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
CPNE8-204ENST00000546603 FAM212AQ96EL1 285 aa17.09■□□□□ 0.33
CPNE8-204ENST00000546603 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
CPNE8-204ENST00000546603 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms