RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 MXRA7P84157 204 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 FKBP4Q02790 459 aaKnown RBP eCLIP11.12□□□□□ -0.63
UBC-213ENST00000546120 TRIM28Q13263 835 aaKnown RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 TMED1Q13445 227 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 LAMB3Q13751 1172 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 SETDB1Q15047 1291 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 TAF11Q15544 211 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 GSTA3Q16772 222 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 KRT71Q3SY84 523 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 MFSD5Q6N075 450 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 ARHGAP22Q7Z5H3 698 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 GRAMD1CQ8IYS0 662 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 STAG2Q8N3U4 1231 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 ENDOVQ8N8Q3 282 aaKnown RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 EPSTI1Q96J88 318 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 KRT12Q99456 494 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 C7orf25Q9BPX7 421 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 PDP2Q9P2J9 529 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.12□□□□□ -0.63
UBC-213ENST00000546120 CAPN6Q9Y6Q1 641 aa11.12□□□□□ -0.63
UBC-213ENST00000546120 F8W031 263 aaPredicted RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 CREB3O43889 395 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 SNX3O60493 162 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 TOM1O60784 492 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 KIF4AO95239 1232 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 GJB6O95452 261 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 EYA4O95677 639 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 SSBP05455 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBC-213ENST00000546120 SKIP12755 728 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 CDC25AP30304 524 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 MATR3P43243 847 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBC-213ENST00000546120 CTCFP49711 727 aaPredicted RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 MAGOHP61326 146 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 EZH2Q15910 746 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 SLC18A3Q16572 532 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 TMC3Q7Z5M5 1100 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 C2CD5Q86YS7 1000 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBC-213ENST00000546120 RASGEF1CQ8N431 466 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 KLHDC4Q8TBB5 520 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 AGAP11Q8TF27 550 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 ANKS1AQ92625 1134 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 GFM2Q969S9 779 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 MAGOHBQ96A72 148 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 TSG101Q99816 390 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 OSBPL1AQ9BXW6 950 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 PABPC3Q9H361 631 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 AGPAT5Q9NUQ2 364 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 IL1RAPL1Q9NZN1 696 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 NDUFA13Q9P0J0 144 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 ARHGAP20Q9P2F6 1191 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 MTRF1LQ9UGC7 380 aaKnown RBP11.11□□□□□ -0.63
UBC-213ENST00000546120 SCOCQ9UIL1 159 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 TMCO1Q9UM00 188 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
UBC-213ENST00000546120 COL22A1Q8NFW1 1626 aaPredicted RBP11.1□□□□□ -0.63
UBC-213ENST00000546120 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.1□□□□□ -0.63
UBC-213ENST00000546120 F8VZ95 297 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 PODXLO00592 558 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 ANXA1P04083 346 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 MMEP08473 750 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 FAM153BP0C7A2 387 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 UBA7P41226 1012 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 TIMM10P62072 90 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 GRIN1Q05586 938 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 AIMP1Q12904 312 aaKnown RBP11.1□□□□□ -0.63
UBC-213ENST00000546120 PTGDRQ13258 359 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 FAM153CQ494X1 144 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 PDXDC1Q6P996 788 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 UNC13DQ70J99 1090 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 ASRGL1Q7L266 308 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 SPATA21Q7Z572 469 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 RAB11FIP4Q86YS3 637 aa11.1□□□□□ -0.63
UBC-213ENST00000546120 ESR2Q92731 530 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms