RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 NFU1Q9UMS0 254 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 DAGLAQ9Y4D2 1042 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 GSTTP1A0A1W2PQM5 241 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ZSCAN5CA6NGD5 496 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 TTLL1O95922 423 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ALAS1P13196 640 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 COPB2P35606 906 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 SLC20A2Q08357 652 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 PRAMEF18Q5VWM3 479 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ADSSL1Q8N142 457 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 SELENOSQ9BQE4 189 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 ARMCX3Q9UH62 379 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-203ENST00000546084 PCDHA13Q9Y5I0 950 aa10.76□□□□□ -0.69
TRAF1-203ENST00000546084 C21orf2O43822 256 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 GNGT1P63211 74 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 CDC37Q16543 378 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-203ENST00000546084 LRRC1Q9BTT6 524 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 LIMA1Q9UHB6 759 aaKnown RBP10.75□□□□□ -0.69
TRAF1-203ENST00000546084 ZBTB39O15060 712 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 TRIM49P0CI25 452 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 TRIM49CP0CI26 452 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 GRM4Q14833 912 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 QRICH1Q2TAL8 776 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 HS2ST1Q7LGA3 356 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 CCDC50Q8IVM0 306 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 LARGE2Q8N3Y3 721 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 DYDC1Q8WWB3 177 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 LEMD3Q9Y2U8 911 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 EPHB6O15197 1021 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-203ENST00000546084 SPATA20Q8TB22 786 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 TBC1D16Q8TBP0 767 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 EFCC1Q9HA90 598 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 HPCAL4Q9UM19 191 aa10.75□□□□□ -0.69
TRAF1-203ENST00000546084 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 RSPH10B2B2RC85 870 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 NDUFAB1O14561 156 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ERLIN2O94905 339 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 RSPH10BP0C881 870 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 XRCC5P13010 732 aaKnown RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 KRT5P13647 590 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ATP2B4P23634 1241 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 PBX1P40424 430 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 TRAPPC10P48553 1259 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 AOC3Q16853 763 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 VWA3BQ502W6 1294 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 SFR1Q86XK3 245 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 MGARPQ8TDB4 240 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 TCHPQ9BT92 498 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 CAPS2Q9BXY5 557 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 PTPN22Q9Y2R2 807 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 BCL9O00512 1426 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 LMO7Q8WWI1 1683 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 GAS7O60861 476 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 PALMO75781 387 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 DLATP10515 647 aaKnown RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 SETQ01105 290 aaPredicted RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ABCB5Q2M3G0 1257 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 CEP85LQ5SZL2 805 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ICE2Q659A1 982 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 PDXDC2PQ6P474 469 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 PEX26Q7Z412 305 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 PACS2Q86VP3 889 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 FBXO11Q86XK2 927 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 DDX42Q86XP3 938 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 BCAS3Q9H6U6 928 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 HEXIM1O94992 359 aaKnown RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 SLCO1A2P46721 670 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ZBED6P86452 979 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ZC2HC1CQ53FD0 456 aaPredicted RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 TRAPPC11Q7Z392 1133 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ZNF512BQ96KM6 892 aaPredicted RBP10.74□□□□□ -0.69
TRAF1-203ENST00000546084 EHD4Q9H223 541 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 USTQ9Y2C2 406 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ITIH6Q6UXX5 1313 aa10.74□□□□□ -0.69
TRAF1-203ENST00000546084 ORC4O43929 436 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 PDHBP11177 359 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 SLC9A1P19634 815 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 EEF1GP26641 437 aaKnown RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 ODR4Q5SWX8 454 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 CTTNBP2NLQ9P2B4 639 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 TNS2Q63HR2 1409 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 MYBL2P10244 700 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 EPB41P11171 864 aaKnown RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 NMT1P30419 496 aaKnown RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 FKBP3Q00688 224 aaKnown RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 COASYQ13057 564 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 PDCLQ13371 301 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 PACSIN1Q9BY11 444 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms