RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 NOS2P35228 1153 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 WDR5P61964 334 aaKnown RBP8.29□□□□□ -1.08
LDHA-223ENST00000545215 COASYQ13057 564 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 GPM6BQ13491 265 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 RTN1Q16799 776 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 EPC2Q52LR7 807 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 ATCAYQ86WG3 371 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 ETFBKMTQ8IXQ9 262 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 ABRAQ8N0Z2 381 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 PARP2Q9UGN5 583 aa8.29□□□□□ -1.08
LDHA-223ENST00000545215 SCN5AQ14524 2016 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 APAF1O14727 1248 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 SCAMP3O14828 347 aaKnown RBP8.28□□□□□ -1.08
LDHA-223ENST00000545215 LINC01565O15544 149 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 CSF1RP07333 972 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 C6orf222P0C671 652 aaPredicted RBP8.28□□□□□ -1.08
LDHA-223ENST00000545215 MAPK8P45983 427 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 CENPCQ03188 943 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 ITGA7Q13683 1181 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 RRP1BQ14684 758 aaKnown RBP8.28□□□□□ -1.08
LDHA-223ENST00000545215 GNASQ5JWF2 1037 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 Q6ZVU0 165 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 ALDH16A1Q8IZ83 802 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 NETO1Q8TDF5 533 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
LDHA-223ENST00000545215 RTP3Q9BQQ7 232 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 TINF2Q9BSI4 451 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 FTOQ9C0B1 505 aaKnown RBP eCLIP8.28□□□□□ -1.086e-6■■■□□ 17.7
LDHA-223ENST00000545215 FAM184BQ9ULE4 1060 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 POLIQ9UNA4 740 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 SORCS3Q9UPU3 1222 aa8.28□□□□□ -1.08
LDHA-223ENST00000545215 FANCMQ8IYD8 2048 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 GRIN2DO15399 1336 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 CHL1O00533 1208 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 ATF7P17544 494 aaPredicted RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 MZF1P28698 734 aaPredicted RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.097e-6■■■■□ 21.3
LDHA-223ENST00000545215 PTGIRP43119 386 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 GJA9P57773 515 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 DEFB103AP81534 67 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 CBLBQ13191 982 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 NNTQ13423 1086 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 UBE4AQ14139 1066 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 KRT24Q2M2I5 525 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 C11orf91Q3C1V1 193 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 GLIS3Q8NEA6 775 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 DDX1Q92499 740 aaKnown RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 BORCS6Q96GS4 357 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 SAMD11Q96NU1 681 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 BBC3Q96PG8 261 aaPredicted RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 CRBNQ96SW2 442 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 MOV10L1Q9BXT6 1211 aaKnown RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 UPF3AQ9H1J1 476 aaKnown RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 INCENPQ9NQS7 918 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 CLEC1BQ9P126 229 aa8.27□□□□□ -1.09
LDHA-223ENST00000545215 USP15Q9Y4E8 981 aaPredicted RBP8.27□□□□□ -1.09
LDHA-223ENST00000545215 EIF4E1BA6NMX2 242 aaKnown RBP8.26□□□□□ -1.09
LDHA-223ENST00000545215 PLIN1O60240 522 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 SP9P0CG40 484 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 SLC19A1P41440 591 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 DAB2P98082 770 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 ENOX2Q16206 610 aaKnown RBP8.26□□□□□ -1.09
LDHA-223ENST00000545215 CATSPERGQ6ZRH7 1159 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 WDR63Q8IWG1 891 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 FLCNQ8NFG4 579 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
LDHA-223ENST00000545215 SECISBP2LQ93073 1101 aaKnown RBP8.26□□□□□ -1.09
LDHA-223ENST00000545215 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
LDHA-223ENST00000545215 NIF3L1Q9GZT8 377 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 IGFLR1Q9H665 355 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 SPC25Q9HBM1 224 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 RNF19AQ9NV58 838 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 USP18Q9UMW8 372 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 ZNF232Q9UNY5 417 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 INSL6Q9Y581 213 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 ATAD5Q96QE3 1844 aa8.26□□□□□ -1.09
LDHA-223ENST00000545215 DMXL2Q8TDJ6 3036 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 IL16Q14005 1332 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 PTPN13Q12923 2485 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 ANKRD18BA2A2Z9 1011 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 CTAGE5O15320 804 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 KINO60870 393 aaKnown RBP8.25□□□□□ -1.09
LDHA-223ENST00000545215 CABYRO75952 493 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 PDGFAP04085 211 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 HOXB7P09629 217 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 IQCF3P0C7M6 154 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 USP5P45974 858 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 NDUFV1P49821 464 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 NKX3-2P78367 333 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 C19orf57Q0VDD7 668 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 PDZD3Q86UT5 571 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 EDEM1Q92611 657 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
LDHA-223ENST00000545215 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 SIL1Q9H173 461 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 KLK14Q9P0G3 267 aa8.25□□□□□ -1.09
LDHA-223ENST00000545215 CNPY2Q9Y2B0 182 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms