RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CEP55Q53EZ4 464 aa17.95■□□□□ 0.46
CCDC78-216ENST00000544996 ALG1Q9BT22 464 aa17.95■□□□□ 0.46
CCDC78-216ENST00000544996 NOC4LQ9BVI4 516 aaKnown RBP17.95■□□□□ 0.46
CCDC78-216ENST00000544996 BCAS3Q9H6U6 928 aa17.95■□□□□ 0.46
CCDC78-216ENST00000544996 H3BRB1 525 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 CYP2C9P11712 490 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 KCNA2P16389 499 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 ARHGAP4P98171 946 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 SP4Q02446 784 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 SHHQ15465 462 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 PTGISQ16647 500 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 PPP1R13LQ8WUF5 828 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 GPR20Q99678 358 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 C16orf70Q9BSU1 422 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 TUT1Q9H6E5 874 aaKnown RBP17.94■□□□□ 0.46
CCDC78-216ENST00000544996 KCNH7Q9NS40 1196 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 PKD2L1Q9P0L9 805 aa17.94■□□□□ 0.46
CCDC78-216ENST00000544996 TRIOBPQ9H2D6 2365 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 HAS3O00219 553 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 ATP9AO75110 1047 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 LGALS2P05162 132 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 CSF2RAP15509 400 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 BFSP2Q13515 415 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
CCDC78-216ENST00000544996 HDAC6Q9UBN7 1215 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 GTF2IRD1Q9UHL9 959 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 ZNF215Q9UL58 517 aaPredicted RBP17.93■□□□□ 0.46
CCDC78-216ENST00000544996 RANBP2P49792 3224 aaKnown RBP17.93■□□□□ 0.46
CCDC78-216ENST00000544996 LTBP2Q14767 1821 aa17.93■□□□□ 0.46
CCDC78-216ENST00000544996 MEIS1O00470 390 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 CYP3A4P08684 503 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 XBP1P17861 261 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 EPHB4P54760 987 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 C9orf50Q5SZB4 431 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 GALNT17Q6IS24 598 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 NIPA1Q7RTP0 329 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 CCDC155Q8N6L0 562 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 RETREG2Q8NC44 543 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 CYP2W1Q8TAV3 490 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 SEPT1Q8WYJ6 367 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 RNPC3Q96LT9 517 aaKnown RBP17.92■□□□□ 0.46
CCDC78-216ENST00000544996 SDF4Q9BRK5 362 aa17.92■□□□□ 0.46
CCDC78-216ENST00000544996 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 SOX1O00570 391 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-216ENST00000544996 CCL23P55773 120 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 UTP14CQ5TAP6 766 aaKnown RBP17.91■□□□□ 0.46
CCDC78-216ENST00000544996 GDF6Q6KF10 455 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-216ENST00000544996 PSRC1Q6PGN9 363 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-216ENST00000544996 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
CCDC78-216ENST00000544996 C22orf23Q9BZE7 217 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 JPH1Q9HDC5 661 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-216ENST00000544996 IL23AQ9NPF7 189 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 PCDHA4Q9UN74 947 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 SCN10AQ9Y5Y9 1956 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 UMODL1Q5DID0 1318 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 STK36Q9NRP7 1315 aa17.91■□□□□ 0.46
CCDC78-216ENST00000544996 ARP10275 920 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 TCF7P36402 384 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-216ENST00000544996 ME3Q16798 604 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 PLA2G4DQ86XP0 818 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 CAGE1Q8TC20 777 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 RASGRP4Q8TDF6 673 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 CRYGNQ8WXF5 182 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 WASF1Q92558 559 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 LRCH3Q96II8 777 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 UPF2Q9HAU5 1272 aaKnown RBP17.9■□□□□ 0.46
CCDC78-216ENST00000544996 AGO4Q9HCK5 861 aaKnown RBP17.9■□□□□ 0.46
CCDC78-216ENST00000544996 SLC9A2Q9UBY0 812 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 NFASCO94856 1347 aa17.9■□□□□ 0.46
CCDC78-216ENST00000544996 FAM86B1E9PN63 330 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 ADAMTS3O15072 1205 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 SLC34A2O95436 690 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 FAM86B2P0C5J1 330 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 ACRP10323 421 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 SETQ01105 290 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-216ENST00000544996 GPR153Q6NV75 609 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 GLG1Q92896 1179 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 GTF3C6Q969F1 213 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
CCDC78-216ENST00000544996 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCDC78-216ENST00000544996 GSTTP1A0A1W2PQM5 241 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 C17orf102A2RUQ5 167 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 FGBP02675 491 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 SMIM10L2AP0DMW4 78 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 SMIM10L2BP0DMW5 78 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 GNAT1P11488 350 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 RFC2P35250 354 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 USP11P51784 963 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 PTK7Q13308 1070 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 TMEM240Q5SV17 173 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 TRIM50Q86XT4 487 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 BLIDQ8IZY5 108 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 DAGLBQ8NCG7 672 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 SCLYQ96I15 445 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
CCDC78-216ENST00000544996 SMARCAD1Q9H4L7 1026 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 AZI2Q9H6S1 392 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms