RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
CHD4-211ENST00000544484 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 PDE11AQ9HCR9 933 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 HOMER3Q9NSC5 361 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 A6NJR5 290 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 POC1B-GALNT4F8VUJ3 575 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 RFX6Q8HWS3 928 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 POTEMA6NI47 508 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 PPFIA4O75335 1185 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 OATP04181 439 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 COL15A1P39059 1388 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L15C9J2P7 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L13C9JLJ4 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L11C9JVI0 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L18D6R9N7 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L24Q0WX57 530 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 USP17L6PQ6QN14 398 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 NLRP7Q8WX94 980 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 ARHGEF1Q92888 912 aaKnown RBP13.92□□□□□ -0.18
CHD4-211ENST00000544484 MIS12Q9H081 205 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 PASKQ96RG2 1323 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 SGK1O00141 431 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 YWHAGP61981 247 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■□□□□ 11.3
CHD4-211ENST00000544484 CUL4BQ13620 913 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
CHD4-211ENST00000544484 DYNLT1P63172 113 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 TMEM179Q6ZVK1 233 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 MXI1P50539 228 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 HAUS2Q9NVX0 235 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 BAIAP2L1Q9UHR4 511 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 EPB41L5Q9HCM4 733 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 TROVE2P10155 538 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHD4-211ENST00000544484 SEPT2Q15019 361 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 CACNA2D3Q8IZS8 1091 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 ENAHQ8N8S7 591 aaPredicted RBP13.91□□□□□ -0.18
CHD4-211ENST00000544484 CDHR1Q96JP9 859 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 NHEJ1Q9H9Q4 299 aaPredicted RBP13.91□□□□□ -0.18
CHD4-211ENST00000544484 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 C2orf54Q08AI8 447 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 ZSCAN26Q16670 478 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 RSRC2Q7L4I2 434 aaKnown RBP13.91□□□□□ -0.18
CHD4-211ENST00000544484 VSTM4Q8IW00 320 aa13.91□□□□□ -0.18
CHD4-211ENST00000544484 DCP1AQ9NPI6 582 aaPredicted RBP13.91□□□□□ -0.18
CHD4-211ENST00000544484 MAGED2Q9UNF1 606 aaPredicted RBP13.91□□□□□ -0.18
CHD4-211ENST00000544484 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 NOL3O60936 208 aaKnown RBP13.9□□□□□ -0.18
CHD4-211ENST00000544484 NXNQ6DKJ4 435 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 RTKN2Q8IZC4 609 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 SCYL1Q96KG9 808 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
CHD4-211ENST00000544484 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 PEX3P56589 373 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 ARID5BQ14865 1188 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 PDZD4Q76G19 769 aaPredicted RBP13.9□□□□□ -0.18
CHD4-211ENST00000544484 FAM160B2Q86V87 743 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
CHD4-211ENST00000544484 ARMC9Q7Z3E5 817 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 ABI1Q8IZP0 508 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 BCAS4Q8TDM0 211 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 HEXIM1O94992 359 aaKnown RBP13.9□□□□□ -0.18
CHD4-211ENST00000544484 IFNAR2P48551 515 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 SCARF1Q14162 830 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 KRT31Q15323 416 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 MAP7D3Q8IWC1 876 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 SLC17A8Q8NDX2 589 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 CEP95Q96GE4 821 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 CAPS2Q9BXY5 557 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 GOLGA8KD6RF30 607 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 MYL1P05976 194 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 RINT1Q6NUQ1 792 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 RNF207Q6ZRF8 634 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 CPDO75976 1380 aa13.9□□□□□ -0.18
CHD4-211ENST00000544484 TXNDC9O14530 226 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 CDC27P30260 824 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 PLTPP55058 493 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 BIRC2Q13490 618 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
CHD4-211ENST00000544484 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
CHD4-211ENST00000544484 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 NCAPD2Q15021 1401 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 PSAPP07602 524 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 ASNSP08243 561 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 ZBED6P86452 979 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 RPS6KA2Q15349 733 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms