RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 HTRA4P83105 476 aaPredicted RBP26.16■■□□□ 1.78
CDKN3-207ENST00000543789 TROAPQ12815 778 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 NEDD9Q14511 834 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 METTL7BQ6UX53 244 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 FBXO22Q8NEZ5 403 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 SEPT8Q92599 483 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 C17orf80Q9BSJ5 609 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 LAMA4Q16363 1823 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 KIAA1217Q5T5P2 1943 aa26.16■■□□□ 1.78
CDKN3-207ENST00000543789 SPATA31C2B4DYI2 1134 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 GNAT1P11488 350 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 PLA2G5P39877 138 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 MRPS9P82933 396 aaKnown RBP26.15■■□□□ 1.78
CDKN3-207ENST00000543789 WTAPQ15007 396 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 SART3Q15020 963 aaKnown RBP26.15■■□□□ 1.78
CDKN3-207ENST00000543789 RUFY2Q8WXA3 655 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 FAM122AQ96E09 287 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 INPP4AQ96PE3 977 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-207ENST00000543789 UBE2ZQ9H832 354 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-207ENST00000543789 RTEL1Q9NZ71 1219 aa26.15■■□□□ 1.78
CDKN3-207ENST00000543789 CAND2O75155 1236 aa26.14■■□□□ 1.78
CDKN3-207ENST00000543789 PTH1RQ03431 593 aa26.14■■□□□ 1.78
CDKN3-207ENST00000543789 CYFIP1Q7L576 1253 aa26.14■■□□□ 1.78
CDKN3-207ENST00000543789 CATIPQ7Z7H3 387 aa26.14■■□□□ 1.78
CDKN3-207ENST00000543789 RALYLQ86SE5 291 aaKnown RBP26.14■■□□□ 1.78
CDKN3-207ENST00000543789 SP7Q8TDD2 431 aaPredicted RBP26.14■■□□□ 1.78
CDKN3-207ENST00000543789 LRFN3Q9BTN0 628 aa26.14■■□□□ 1.78
CDKN3-207ENST00000543789 GSPT1P15170 499 aaKnown RBP26.13■■□□□ 1.77
CDKN3-207ENST00000543789 TMEM31Q5JXX7 168 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 TTC22Q5TAA0 569 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 NCOA7Q8NI08 942 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 PIBF1Q8WXW3 757 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 TOP1MTQ969P6 601 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 GPR20Q99678 358 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 SETD4Q9NVD3 440 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 FRMPD4Q14CM0 1322 aa26.13■■□□□ 1.77
CDKN3-207ENST00000543789 FIBPO43427 364 aa26.12■■□□□ 1.77
CDKN3-207ENST00000543789 CTSHP09668 335 aa26.12■■□□□ 1.77
CDKN3-207ENST00000543789 LEXMQ3ZCV2 418 aa26.12■■□□□ 1.77
CDKN3-207ENST00000543789 MRPL38Q96DV4 380 aaKnown RBP26.12■■□□□ 1.77
CDKN3-207ENST00000543789 SAMD11Q96NU1 681 aa26.12■■□□□ 1.77
CDKN3-207ENST00000543789 YME1L1Q96TA2 773 aa26.12■■□□□ 1.77
CDKN3-207ENST00000543789 E7EWF7 191 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 KCNA5P22460 613 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 PDE4AP27815 886 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 SEMA3FQ13275 785 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 PTPROQ16827 1216 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 EPC2Q52LR7 807 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 OSBPL7Q9BZF2 842 aa26.11■■□□□ 1.77
CDKN3-207ENST00000543789 ZNF215Q9UL58 517 aaPredicted RBP26.11■■□□□ 1.77
CDKN3-207ENST00000543789 PTPRSQ13332 1948 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 UPP2O95045 317 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 CHMLP26374 656 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 SMARCC2Q8TAQ2 1214 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 IGDCC4Q8TDY8 1250 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 KHSRPQ92945 711 aaKnown RBP eCLIP26.1■■□□□ 1.77
CDKN3-207ENST00000543789 CUL5Q93034 780 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 CD320Q9NPF0 282 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 TAF6LQ9Y6J9 622 aa26.1■■□□□ 1.77
CDKN3-207ENST00000543789 UTP14CQ5TAP6 766 aaKnown RBP26.09■■□□□ 1.77
CDKN3-207ENST00000543789 XRRA1Q6P2D8 792 aa26.09■■□□□ 1.77
CDKN3-207ENST00000543789 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.09■■□□□ 1.77
CDKN3-207ENST00000543789 APBB2Q92870 758 aa26.09■■□□□ 1.77
CDKN3-207ENST00000543789 SENP7Q9BQF6 1050 aa26.09■■□□□ 1.77
CDKN3-207ENST00000543789 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.08■■□□□ 1.77
CDKN3-207ENST00000543789 GPR37L1O60883 481 aa26.08■■□□□ 1.77
CDKN3-207ENST00000543789 PCNX4Q63HM2 1172 aa26.08■■□□□ 1.77
CDKN3-207ENST00000543789 USP17L6PQ6QN14 398 aa26.08■■□□□ 1.77
CDKN3-207ENST00000543789 TRIM50Q86XT4 487 aa26.08■■□□□ 1.77
CDKN3-207ENST00000543789 RRP36Q96EU6 259 aaKnown RBP26.08■■□□□ 1.77
CDKN3-207ENST00000543789 HCN4Q9Y3Q4 1203 aa26.08■■□□□ 1.77
CDKN3-207ENST00000543789 TELO2Q9Y4R8 837 aa26.08■■□□□ 1.77
CDKN3-207ENST00000543789 ARIH1Q9Y4X5 557 aaPredicted RBP26.08■■□□□ 1.77
CDKN3-207ENST00000543789 PI4K2BG5E9Z4 385 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 H3BNC9 293 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 ADAM17P78536 824 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 ARHGAP4P98171 946 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 SP4Q02446 784 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 GPM6BQ13491 265 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 FAM26DQ5JW98 314 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 NLRX1Q86UT6 975 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 TMEM192Q8IY95 271 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 YTHDC1Q96MU7 727 aaKnown RBP26.07■■□□□ 1.76
CDKN3-207ENST00000543789 MAP3K14Q99558 947 aa26.07■■□□□ 1.76
CDKN3-207ENST00000543789 MYH6P13533 1939 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 PIK3CDO00329 1044 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 SMARCA1P28370 1054 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 KIF5BP33176 963 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 ANTXR2P58335 489 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 TIGD5Q53EQ6 642 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 FAM178BQ8IXR5 827 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 GJD3Q8N144 294 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 GIMAP8Q8ND71 665 aaPredicted RBP26.06■■□□□ 1.76
CDKN3-207ENST00000543789 CTCFLQ8NI51 663 aaPredicted RBP26.06■■□□□ 1.76
CDKN3-207ENST00000543789 LMBR1Q8WVP7 490 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 SPZ1Q9BXG8 430 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 IFIH1Q9BYX4 1025 aaKnown RBP26.06■■□□□ 1.76
CDKN3-207ENST00000543789 NRCAMQ92823 1304 aa26.06■■□□□ 1.76
CDKN3-207ENST00000543789 MEIS2O14770 477 aa26.05■■□□□ 1.76
CDKN3-207ENST00000543789 PUS10Q3MIT2 529 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms