RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TRIP12Q14669 1992 aaPredicted RBP20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 COL9A1P20849 921 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 ICAM3P32942 547 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 HIC1Q14526 733 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 MBTPS1Q14703 1052 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 TCTN1Q2MV58 587 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 CYFIP1Q7L576 1253 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 SPRED2Q7Z698 418 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 DBF4BQ8NFT6 615 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 IGDCC4Q8TDY8 1250 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 GDPD5Q8WTR4 605 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 NECAB3Q96P71 396 aaPredicted RBP20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 MAP3K14Q99558 947 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 ZNF215Q9UL58 517 aaPredicted RBP20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 INSL6Q9Y581 213 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
PPP1CA-210ENST00000542876 FRMPD4Q14CM0 1322 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 LINC01553A4QN01 128 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 SPATA31C2B4DYI2 1134 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 LPXNO60711 386 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 CAND2O75155 1236 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 DDAH1O94760 285 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 ERVK-21P61565 698 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 MRPS9P82933 396 aaKnown RBP20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 XRRA1Q6P2D8 792 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 MB21D2Q8IYB1 491 aaPredicted RBP20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 MYOCDQ8IZQ8 938 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 MAP4K1Q92918 833 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 LZTS2Q9BRK4 669 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 RNPEPQ9H4A4 650 aa20.08■□□□□ 0.81
PPP1CA-210ENST00000542876 TRANK1O15050 2925 aa20.08■□□□□ 0.8
PPP1CA-210ENST00000542876 TREHO43280 583 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 GNAQP50148 359 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 ANTXR2P58335 489 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 NFXL1Q6ZNB6 911 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 NLRX1Q86UT6 975 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 ZNF654Q8IZM8 581 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 TMTC2Q8N394 836 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 SEPT8Q92599 483 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 GPR20Q99678 358 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 SUGCTQ9HAC7 445 aa20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 RBM8AQ9Y5S9 174 aaKnown RBP20.07■□□□□ 0.8
PPP1CA-210ENST00000542876 BDP1A6H8Y1 2624 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 SMARCA1P28370 1054 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 HOXC8P31273 242 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 PLEKHG4Q58EX7 1191 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 UTP14CQ5TAP6 766 aaKnown RBP20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 PCNX4Q63HM2 1172 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 USP17L6PQ6QN14 398 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■■■□ 19.9
PPP1CA-210ENST00000542876 GIMAP8Q8ND71 665 aaPredicted RBP20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 MTA3Q9BTC8 594 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 MYL10Q9BUA6 226 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 BCAS3Q9H6U6 928 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 LY9Q9HBG7 655 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 SETD4Q9NVD3 440 aa20.06■□□□□ 0.8
PPP1CA-210ENST00000542876 CCDC69A6NI79 296 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 PIK3CDO00329 1044 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 PRC1O43663 620 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 CTSHP09668 335 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 MCM5P33992 734 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 SP4Q02446 784 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 SENP7Q9BQF6 1050 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 C1QTNF1Q9BXJ1 281 aa20.05■□□□□ 0.8
PPP1CA-210ENST00000542876 SEMA3FQ13275 785 aa20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 FBXO22Q8NEZ5 403 aa20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 CDHR1Q96JP9 859 aa20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 TMEM87BQ96K49 555 aa20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 YME1L1Q96TA2 773 aa20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 BAZ2BQ9UIF8 2168 aaKnown RBP20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 MYH7BA7E2Y1 1941 aa20.04■□□□□ 0.8
PPP1CA-210ENST00000542876 CALM1P0DP23 149 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 CALM2P0DP24 149 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 CALM3P0DP25 149 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 ARHGAP4P98171 946 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 TRIM50Q86XT4 487 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 SAMD11Q96NU1 681 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 PSTPIP2Q9H939 334 aa20.03■□□□□ 0.8
PPP1CA-210ENST00000542876 NRCAMQ92823 1304 aa20.02■□□□□ 0.8
PPP1CA-210ENST00000542876 MEIS2O14770 477 aa20.02■□□□□ 0.8
PPP1CA-210ENST00000542876 HTRA4P83105 476 aaPredicted RBP20.02■□□□□ 0.8
PPP1CA-210ENST00000542876 APBB2Q92870 758 aa20.02■□□□□ 0.8
PPP1CA-210ENST00000542876 GPRASP2Q96D09 838 aa20.02■□□□□ 0.8
PPP1CA-210ENST00000542876 C17orf80Q9BSJ5 609 aa20.02■□□□□ 0.8
PPP1CA-210ENST00000542876 REV3LO60673 3130 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 SPDYE3A6NKU9 549 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 SH2B2O14492 632 aaPredicted RBP20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 UPP2O95045 317 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 MKRN4PQ13434 485 aaPredicted RBP20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 PTPROQ16827 1216 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 SRBD1Q8N5C6 995 aaKnown RBP20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 SP7Q8TDD2 431 aaPredicted RBP20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 LMBR1Q8WVP7 490 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 TOP1MTQ969P6 601 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 SLC12A7Q9Y666 1083 aa20.01■□□□□ 0.79
PPP1CA-210ENST00000542876 PTPRSQ13332 1948 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms