RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ODF1Q14990 250 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 DDB1Q16531 1140 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 TMEM95Q3KNT9 176 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 FAM83BQ5T0W9 1011 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 GPR158Q5T848 1215 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 ERAP2Q6P179 960 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 LBX2Q6XYB7 198 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 POU5F2Q8N7G0 328 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 ENAHQ8N8S7 591 aaPredicted RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 FLCNQ8NFG4 579 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDH19Q8TAB3 1148 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 NPLOC4Q8TAT6 608 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 FRS2Q8WU20 508 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 COPS5Q92905 334 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 NMRK2Q9NPI5 230 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 FAM105AQ9NUU6 356 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 ST14Q9Y5Y6 855 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 BAZ1AQ9NRL2 1556 aaPredicted RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 CCDC66A2RUB6 948 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 MEIS1O00470 390 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 TBX3O15119 743 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 SIGLEC6O43699 453 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 MSCO60682 206 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 SLITRK5O94991 958 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 SOD2P04179 222 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 CD3EP07766 207 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 NFICP08651 508 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 HSPA6P17066 643 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 CD53P19397 219 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 RAB6AP20340 208 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 SERPINB3P29508 390 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 JAG1P78504 1218 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 RBM10P98175 930 aaKnown RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 GALEQ14376 348 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 TESK1Q15569 626 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 FAM47CQ5HY64 1035 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 CWF19L1Q69YN2 538 aaKnown RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 OVCH1Q7RTY7 1134 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 TMC3Q7Z5M5 1100 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 AMOTL1Q8IY63 956 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 EFHBQ8N7U6 833 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 MYRIPQ8NFW9 859 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 RUNDC1Q96C34 613 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 MCMBPQ9BTE3 642 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 SEMA6CQ9H3T2 930 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 LRRC4CQ9HCJ2 640 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 GPRC5CQ9NQ84 441 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 PAK6Q9NQU5 681 aaPredicted RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 DDX21Q9NR30 783 aaKnown RBP eCLIP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 CHST7Q9NS84 486 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 OXSMQ9NWU1 459 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 H2AFY2Q9P0M6 372 aaPredicted RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 ZC3H7BQ9UGR2 993 aaKnown RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 TMEFF2Q9UIK5 374 aaPredicted RBP4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 BACE2Q9Y5Z0 518 aa4.93□□□□□ -1.62
SFSWAP-211ENST00000542813 HMGXB3Q12766 1538 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 C2orf71A6NGG8 1288 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 TRIM75PA6NK02 468 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 AURKAO14965 403 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PMM2O15305 246 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA12O60330 932 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 LRRN2O75325 713 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PRAMEF1O95521 474 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 LTBRP36941 435 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 TRAPPC10P48553 1259 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 DNM2P50570 870 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 ZNF280AP59817 542 aaPredicted RBP4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 HTRA3P83110 453 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 KCNAB2Q13303 367 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 LRRC32Q14392 662 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 KIZQ2M2Z5 673 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 IFIT1BQ5T764 474 aaKnown RBP4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 EFCAB2Q5VUJ9 269 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 BROXQ5VW32 411 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 ANO1Q5XXA6 986 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 E4F1Q66K89 784 aaPredicted RBP4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 CREB3L3Q68CJ9 461 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 TOGARAM2Q6ZUX3 1019 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 ZNF765Q7L2R6 523 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 CISD2Q8N5K1 135 aaKnown RBP4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PAF1Q8N7H5 531 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 VPS37AQ8NEZ2 397 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 GJA10Q969M2 543 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 ACSS3Q9H6R3 686 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PLCB1Q9NQ66 1216 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 CASS4Q9NQ75 786 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 C1orf112Q9NSG2 853 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PHTF1Q9UMS5 762 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 INVSQ9Y283 1065 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 ZNF652Q9Y2D9 606 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA9Q9Y5G4 932 aaKnown RBP4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA8Q9Y5G5 932 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA7Q9Y5G6 932 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA6Q9Y5G7 932 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA3Q9Y5H0 932 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 PCDHGA2Q9Y5H1 932 aa4.92□□□□□ -1.62
SFSWAP-211ENST00000542813 KLHL33A6NCF5 533 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 WNT9AO14904 365 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms