RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 ENOX1Q8TC92 643 aaKnown RBP12.33□□□□□ -0.44
SCG3-202ENST00000542355 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
SCG3-202ENST00000542355 MED15Q96RN5 788 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
SCG3-202ENST00000542355 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 CYP39A1Q9NYL5 469 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 MAPK8IP1Q9UQF2 711 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 GDAQ9Y2T3 454 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 WDR90Q96KV7 1748 aa12.33□□□□□ -0.44
SCG3-202ENST00000542355 POTEFA5A3E0 1075 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 SSBP05455 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCG3-202ENST00000542355 SPATA31C1P0DKV0 1188 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 ATP1A3P13637 1013 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 RPA1P27694 616 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 STX17P56962 302 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 CYP4A11Q02928 519 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 MOGSQ13724 837 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 POTEGQ6S5H5 508 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 MB21D1Q8N884 522 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 EIF2AK1Q9BQI3 630 aaKnown RBP12.32□□□□□ -0.44
SCG3-202ENST00000542355 PAGR1Q9BTK6 254 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 JADE2Q9NQC1 790 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
SCG3-202ENST00000542355 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 RHOBTB3O94955 611 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 BCRP11274 1271 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 HERVK_113P62684 666 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 PPP2R5CQ13362 524 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 SNAPC2Q13487 334 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 MTMR1Q13613 665 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 HSP90AA4PQ58FG1 418 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 CT47A1Q5JQC4 288 aaPredicted RBP12.32□□□□□ -0.44
SCG3-202ENST00000542355 CHST13Q8NET6 341 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 SPATC1LQ9H0A9 340 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
SCG3-202ENST00000542355 FRMPD4Q14CM0 1322 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 DDX39AO00148 427 aaKnown RBP12.31□□□□□ -0.44
SCG3-202ENST00000542355 SLC26A4O43511 780 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 COBLO75128 1261 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 CELF2O95319 508 aaKnown RBP12.31□□□□□ -0.44
SCG3-202ENST00000542355 NR3C2P08235 984 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 PLA2G4BP0C869 781 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 PRCPP42785 496 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 PSMC6P62333 389 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 NIPA1Q7RTP0 329 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 NCAPG2Q86XI2 1143 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 NSUN6Q8TEA1 469 aaKnown RBP12.31□□□□□ -0.44
SCG3-202ENST00000542355 DDX12PQ92771 950 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
SCG3-202ENST00000542355 TEKT3Q9BXF9 490 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 LRRC27Q9C0I9 530 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 GBA2Q9HCG7 927 aaPredicted RBP12.31□□□□□ -0.44
SCG3-202ENST00000542355 EXOC1Q9NV70 894 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
SCG3-202ENST00000542355 IDEP14735 1019 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 OSBPP22059 807 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 PABPC4Q13310 644 aaKnown RBP eCLIP12.3□□□□□ -0.446e-12■■□□□ 13.3
SCG3-202ENST00000542355 CTTNQ14247 550 aaKnown RBP12.3□□□□□ -0.44
SCG3-202ENST00000542355 VSIG10LQ86VR7 867 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 GIMAP8Q8ND71 665 aaPredicted RBP12.3□□□□□ -0.44
SCG3-202ENST00000542355 RIT2Q99578 217 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 HSD17B14Q9BPX1 270 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
SCG3-202ENST00000542355 UNC45AQ9H3U1 944 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 AGO4Q9HCK5 861 aaKnown RBP12.3□□□□□ -0.44
SCG3-202ENST00000542355 CTNND2Q9UQB3 1225 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 RLFQ13129 1914 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 UNCXA6NJT0 531 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 SLITRK3O94933 977 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 FCER1AP12319 257 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 CCND2P30279 289 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 FANCCQ00597 558 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 STK4Q13043 487 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 UNC13DQ70J99 1090 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 HPS3Q969F9 1004 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 DYDC2Q96IM9 177 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 SAMSN1Q9NSI8 373 aaKnown RBP12.3□□□□□ -0.44
SCG3-202ENST00000542355 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
SCG3-202ENST00000542355 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
SCG3-202ENST00000542355 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
SCG3-202ENST00000542355 CNMDO75829 334 aa12.29□□□□□ -0.44
SCG3-202ENST00000542355 SERPINC1P01008 464 aa12.29□□□□□ -0.44
SCG3-202ENST00000542355 FKBP1BP68106 108 aa12.29□□□□□ -0.44
SCG3-202ENST00000542355 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
SCG3-202ENST00000542355 ITGB3BPQ13352 177 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms