RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 EHHADHQ08426 723 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 PDCD7Q8N8D1 485 aaKnown RBP13.54□□□□□ -0.24
KDM3A-216ENST00000542128 PPP1R14CQ8TAE6 165 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
KDM3A-216ENST00000542128 MAN1B1Q9UKM7 699 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 L3MBTL1Q9Y468 752 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
KDM3A-216ENST00000542128 ZNF189O75820 626 aaPredicted RBP13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ATP6V1G2O95670 118 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 DNM2P50570 870 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ZNF449Q6P9G9 518 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ARL8AQ96BM9 186 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 LRRC1Q9BTT6 524 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 CCT8L1PA6NM43 557 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 STAMBPO95630 424 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ALAS1P13196 640 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ATP5JP18859 108 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
KDM3A-216ENST00000542128 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 COBLO75128 1261 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ADORA1P30542 326 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 OLFML2BQ68BL8 750 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ANKRD35Q8N283 1001 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 TC2NQ8N9U0 490 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 RNF14Q9UBS8 474 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 IKBKGQ9Y6K9 419 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 V9GY48 417 aaPredicted RBP13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ANO9A1A5B4 782 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 SSH3Q8TE77 659 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 BLZF1Q9H2G9 400 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 COPRSQ9NQ92 184 aa13.53□□□□□ -0.24
KDM3A-216ENST00000542128 RNF8O76064 485 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 LMNAP02545 664 aaKnown RBP13.52□□□□□ -0.24
KDM3A-216ENST00000542128 IREB2P48200 963 aaKnown RBP13.52□□□□□ -0.24
KDM3A-216ENST00000542128 LETM2Q2VYF4 491 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 MIGA2Q7L4E1 593 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 PEX26Q7Z412 305 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 KSR1Q8IVT5 923 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.24
KDM3A-216ENST00000542128 NAF1Q96HR8 494 aaKnown RBP13.52□□□□□ -0.24
KDM3A-216ENST00000542128 PLVAPQ9BX97 442 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 GGT7Q9UJ14 662 aa13.52□□□□□ -0.24
KDM3A-216ENST00000542128 SEMA3EO15041 775 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 EZH1Q92800 747 aaPredicted RBP13.52□□□□□ -0.25
KDM3A-216ENST00000542128 COA1Q9GZY4 146 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
KDM3A-216ENST00000542128 ARPP21Q9UBL0 812 aaPredicted RBP13.52□□□□□ -0.25
KDM3A-216ENST00000542128 CDC42BPGQ6DT37 1551 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 MOCS3O95396 460 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 KCNA3P22001 575 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 PTPROQ16827 1216 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 AOC3Q16853 763 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 RBM43Q6ZSC3 357 aaKnown RBP13.52□□□□□ -0.25
KDM3A-216ENST00000542128 DNAJC9Q8WXX5 260 aa13.52□□□□□ -0.25
KDM3A-216ENST00000542128 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 TEX33O43247 280 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 CHMP2AO43633 222 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
KDM3A-216ENST00000542128 DPP9Q86TI2 863 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 CCDC110Q8TBZ0 833 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 LRRC27Q9C0I9 530 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 FRMPD1Q5SYB0 1578 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 TROVE2P10155 538 aaKnown RBP eCLIP13.51□□□□□ -0.25
KDM3A-216ENST00000542128 TMOD1P28289 359 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 SLC16A10Q8TF71 515 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 TAF1DQ9H5J8 278 aaPredicted RBP13.51□□□□□ -0.25
KDM3A-216ENST00000542128 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 NECTIN1Q15223 517 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 SPATA21Q7Z572 469 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 SPATA4Q8NEY3 305 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 PHKBQ93100 1093 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.51□□□□□ -0.25
KDM3A-216ENST00000542128 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 FAM53CQ9NYF3 392 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 ANGEL1Q9UNK9 670 aaKnown RBP13.51□□□□□ -0.25
KDM3A-216ENST00000542128 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
KDM3A-216ENST00000542128 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
KDM3A-216ENST00000542128 SLCO1A2P46721 670 aa13.5□□□□□ -0.25
KDM3A-216ENST00000542128 SPICE1Q8N0Z3 855 aa13.5□□□□□ -0.25
KDM3A-216ENST00000542128 KIF2BQ8N4N8 673 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms