RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 A0A1B0GTL3 188 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 BLACEA4D250 179 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 SH3D21A4FU49 640 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 OTOL1A6NHN0 477 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-217ENST00000541578 MAFKO60675 156 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 KCNC1P48547 511 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 GPR85P60893 370 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 PLEKHG4Q58EX7 1191 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 EMC4Q5J8M3 183 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 LBX2Q6XYB7 198 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 TTLL7Q6ZT98 887 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 IFNL3Q8IZI9 196 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 FEZF2Q8TBJ5 459 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 IPO9Q96P70 1041 aaKnown RBP5.81□□□□□ -1.48
SNHG1-217ENST00000541578 CDC6Q99741 560 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 GORASP1Q9BQQ3 440 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 XYLT2Q9H1B5 865 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 SMOC1Q9H4F8 434 aa5.81□□□□□ -1.48
SNHG1-217ENST00000541578 METTL14Q9HCE5 456 aaKnown RBP5.81□□□□□ -1.48
SNHG1-217ENST00000541578 ADAMTS20P59510 1910 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 TCRBV5S2A0A599 114 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 ESYT3A0FGR9 886 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 KRIT1O00522 736 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 ADCY3O60266 1144 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 RAB11FIP3O75154 756 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 STAT5AP42229 794 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 SARSP49591 514 aaKnown RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 NKX3-2P78367 333 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 DLX2Q07687 328 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 SMAD4Q13485 552 aaKnown RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 KIZQ2M2Z5 673 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 STYK1Q6J9G0 422 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 NOL8Q76FK4 1167 aaKnown RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 ZDHHC14Q8IZN3 488 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 TTLL6Q8N841 843 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 ZBTB38Q8NAP3 1195 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 ARRDC4Q8NCT1 418 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 PHOSPHO1Q8TCT1 267 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 TOE1Q96GM8 510 aaKnown RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 C20orf173Q96LM9 149 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 C11orf84Q9BUA3 381 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 BRINP2Q9C0B6 783 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 SPATA6Q9NWH7 488 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-217ENST00000541578 NTMQ9P121 344 aa5.8□□□□□ -1.48
SNHG1-217ENST00000541578 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 DIAPH1O60610 1272 aaKnown RBP5.79□□□□□ -1.48
SNHG1-217ENST00000541578 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 C16orf86Q6ZW13 317 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 TRIM48Q8IWZ4 208 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 CARFQ8N187 725 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 KYQ8NBH2 561 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNHG1-217ENST00000541578 PIP4K2CQ8TBX8 421 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 THAP3Q8WTV1 239 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-217ENST00000541578 RELTQ969Z4 430 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 GPATCH3Q96I76 525 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 FEZ1Q99689 392 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 KCNJ15Q99712 375 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 SPATA25Q9BR10 227 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 SLC6A20Q9NP91 592 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 MYOTQ9UBF9 498 aa5.79□□□□□ -1.48
SNHG1-217ENST00000541578 PPARGC1AQ9UBK2 798 aaKnown RBP5.79□□□□□ -1.48
SNHG1-217ENST00000541578 TRBV23-1A0A0A0MS06 115 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 A0A0G2JLL6 359 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-217ENST00000541578 MARCH6O60337 910 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 FAM153BP0C7A2 387 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 GRK2P25098 689 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 GRK3P35626 688 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 SPIRE1Q08AE8 756 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 TCEA2Q15560 299 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 C2orf27AQ580R0 203 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 FAM209AQ5JX71 171 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 CYP4F22Q6NT55 531 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 STK32CQ86UX6 486 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 LILRB2Q8N423 598 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 ALG1Q9BT22 464 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 POLR3GLQ9BT43 218 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 PCDH12Q9NPG4 1184 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 RTEL1Q9NZ71 1219 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 NUB1Q9Y5A7 615 aa5.78□□□□□ -1.48
SNHG1-217ENST00000541578 FAM47E-STBD1D6RA91 191 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 SOD2P04179 222 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 GNAT1P11488 350 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 COL6A2P12110 1019 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 CNGA1P29973 690 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 THBS2P35442 1172 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 ITGA1P56199 1179 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 SUMO1P63165 101 aaKnown RBP5.77□□□□□ -1.49
SNHG1-217ENST00000541578 NFIXQ14938 502 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 LONRF2Q1L5Z9 754 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 FOXB2Q5VYV0 432 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 OTOP3Q7RTS5 596 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 FRMD5Q7Z6J6 570 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 SYNPOQ8N3V7 929 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 TMEM260Q9NX78 707 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 DTLQ9NZJ0 730 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 ASH2LQ9UBL3 628 aa5.77□□□□□ -1.49
SNHG1-217ENST00000541578 DCAF1Q9Y4B6 1507 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms