RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.72■■■□□ 2.03
LEMD3-203ENST00000541171 MYL10Q9BUA6 226 aa27.72■■■□□ 2.03
LEMD3-203ENST00000541171 COG5Q9UP83 839 aa27.72■■■□□ 2.03
LEMD3-203ENST00000541171 COL9A1P20849 921 aa27.71■■■□□ 2.03
LEMD3-203ENST00000541171 CYFIP1Q7L576 1253 aa27.71■■■□□ 2.03
LEMD3-203ENST00000541171 MB21D2Q8IYB1 491 aaPredicted RBP27.71■■■□□ 2.03
LEMD3-203ENST00000541171 DBF4BQ8NFT6 615 aa27.71■■■□□ 2.03
LEMD3-203ENST00000541171 SMARCC2Q8TAQ2 1214 aa27.71■■■□□ 2.03
LEMD3-203ENST00000541171 NCOR1O75376 2440 aa27.7■■■□□ 2.03
LEMD3-203ENST00000541171 TREHO43280 583 aa27.7■■■□□ 2.02
LEMD3-203ENST00000541171 NEDD9Q14511 834 aa27.7■■■□□ 2.02
LEMD3-203ENST00000541171 CTCFLQ8NI51 663 aaPredicted RBP27.7■■■□□ 2.02
LEMD3-203ENST00000541171 HLA-CQ95604 372 aa27.7■■■□□ 2.02
LEMD3-203ENST00000541171 TGS1Q96RS0 853 aaKnown RBP27.7■■■□□ 2.02
LEMD3-203ENST00000541171 RNPEPQ9H4A4 650 aa27.7■■■□□ 2.02
LEMD3-203ENST00000541171 RBM8AQ9Y5S9 174 aaKnown RBP27.7■■■□□ 2.02
LEMD3-203ENST00000541171 EMSYQ7Z589 1322 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 LINC01553A4QN01 128 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 SPATA31C2B4DYI2 1134 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 ICAM3P32942 547 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 SEMA3FQ13275 785 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 UTP14CQ5TAP6 766 aaKnown RBP27.69■■■□□ 2.02
LEMD3-203ENST00000541171 USP17L6PQ6QN14 398 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 ZNF654Q8IZM8 581 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 MYOCDQ8IZQ8 938 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 MAP4K1Q92918 833 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 CUL5Q93034 780 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 RRP36Q96EU6 259 aaKnown RBP27.69■■■□□ 2.02
LEMD3-203ENST00000541171 INPP4AQ96PE3 977 aaPredicted RBP27.69■■■□□ 2.02
LEMD3-203ENST00000541171 SUGCTQ9HAC7 445 aa27.69■■■□□ 2.02
LEMD3-203ENST00000541171 FRMPD4Q14CM0 1322 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 STAM2O75886 525 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 AMHP03971 560 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 CTSHP09668 335 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 ERVK-21P61565 698 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 SP4Q02446 784 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 METTL7BQ6UX53 244 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 GPR20Q99678 358 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 USP26Q9BXU7 913 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 LY9Q9HBG7 655 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 TELO2Q9Y4R8 837 aa27.68■■■□□ 2.02
LEMD3-203ENST00000541171 FIBPO43427 364 aa27.67■■■□□ 2.02
LEMD3-203ENST00000541171 CASC1Q6TDU7 716 aa27.67■■■□□ 2.02
LEMD3-203ENST00000541171 NFXL1Q6ZNB6 911 aa27.67■■■□□ 2.02
LEMD3-203ENST00000541171 TRIM50Q86XT4 487 aa27.67■■■□□ 2.02
LEMD3-203ENST00000541171 SETD4Q9NVD3 440 aa27.67■■■□□ 2.02
LEMD3-203ENST00000541171 PRC1O43663 620 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 KIF5BP33176 963 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 SPZ1Q9BXG8 430 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 LMCD1Q9NZU5 365 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 SEC63Q9UGP8 760 aaKnown RBP27.66■■■□□ 2.02
LEMD3-203ENST00000541171 RAPGEFL1Q9UHV5 662 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 INSL6Q9Y581 213 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 BDP1A6H8Y1 2624 aa27.66■■■□□ 2.02
LEMD3-203ENST00000541171 XIRP2A4UGR9 3374 aa27.65■■■□□ 2.02
LEMD3-203ENST00000541171 DDAH1O94760 285 aa27.65■■■□□ 2.02
LEMD3-203ENST00000541171 HOXC8P31273 242 aa27.65■■■□□ 2.02
LEMD3-203ENST00000541171 PLEKHG4Q58EX7 1191 aa27.65■■■□□ 2.02
LEMD3-203ENST00000541171 MAP3K14Q99558 947 aa27.65■■■□□ 2.02
LEMD3-203ENST00000541171 OSBPL7Q9BZF2 842 aa27.65■■■□□ 2.02
LEMD3-203ENST00000541171 COL4A4P53420 1690 aaPredicted RBP27.65■■■□□ 2.02
LEMD3-203ENST00000541171 MEIS2O14770 477 aa27.64■■■□□ 2.02
LEMD3-203ENST00000541171 PLEKHA8P1O95397 391 aa27.64■■■□□ 2.02
LEMD3-203ENST00000541171 GNAT1P11488 350 aa27.64■■■□□ 2.02
LEMD3-203ENST00000541171 PCNX4Q63HM2 1172 aa27.64■■■□□ 2.02
LEMD3-203ENST00000541171 CMTR1Q8N1G2 835 aaKnown RBP27.64■■■□□ 2.02
LEMD3-203ENST00000541171 SEPT8Q92599 483 aa27.64■■■□□ 2.02
LEMD3-203ENST00000541171 C17orf80Q9BSJ5 609 aa27.64■■■□□ 2.02
LEMD3-203ENST00000541171 CCDC69A6NI79 296 aa27.63■■■□□ 2.01
LEMD3-203ENST00000541171 RXRAP19793 462 aa27.63■■■□□ 2.01
LEMD3-203ENST00000541171 ARHGAP4P98171 946 aa27.63■■■□□ 2.01
LEMD3-203ENST00000541171 NLRX1Q86UT6 975 aa27.63■■■□□ 2.01
LEMD3-203ENST00000541171 RAB11FIP4Q86YS3 637 aa27.63■■■□□ 2.01
LEMD3-203ENST00000541171 SRBD1Q8N5C6 995 aaKnown RBP27.63■■■□□ 2.01
LEMD3-203ENST00000541171 LZTS2Q9BRK4 669 aa27.63■■■□□ 2.01
LEMD3-203ENST00000541171 ZNF215Q9UL58 517 aaPredicted RBP27.63■■■□□ 2.01
LEMD3-203ENST00000541171 UPP2O95045 317 aa27.62■■■□□ 2.01
LEMD3-203ENST00000541171 MKRN4PQ13434 485 aaPredicted RBP27.62■■■□□ 2.01
LEMD3-203ENST00000541171 FBXO22Q8NEZ5 403 aa27.62■■■□□ 2.01
LEMD3-203ENST00000541171 PIK3CDO00329 1044 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 SH2B2O14492 632 aaPredicted RBP27.61■■■□□ 2.01
LEMD3-203ENST00000541171 SMARCA1P28370 1054 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 MCM5P33992 734 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 GNAQP50148 359 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 XRRA1Q6P2D8 792 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 SENP7Q9BQF6 1050 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 DOCK5Q9H7D0 1870 aa27.61■■■□□ 2.01
LEMD3-203ENST00000541171 hCG_1642624A0A1W2PR95 340 aa27.6■■■□□ 2.01
LEMD3-203ENST00000541171 CAND2O75155 1236 aa27.6■■■□□ 2.01
LEMD3-203ENST00000541171 HTRA4P83105 476 aaPredicted RBP27.6■■■□□ 2.01
LEMD3-203ENST00000541171 COL9A3Q14050 684 aaPredicted RBP27.6■■■□□ 2.01
LEMD3-203ENST00000541171 TMTC2Q8N394 836 aa27.6■■■□□ 2.01
LEMD3-203ENST00000541171 CCDC82Q8N4S0 544 aa27.6■■■□□ 2.01
LEMD3-203ENST00000541171 YME1L1Q96TA2 773 aa27.6■■■□□ 2.01
LEMD3-203ENST00000541171 PSTPIP2Q9H939 334 aa27.6■■■□□ 2.01
LEMD3-203ENST00000541171 LMBR1Q8WVP7 490 aa27.59■■■□□ 2.01
LEMD3-203ENST00000541171 TMEM87BQ96K49 555 aa27.59■■■□□ 2.01
LEMD3-203ENST00000541171 MTA3Q9BTC8 594 aa27.59■■■□□ 2.01
LEMD3-203ENST00000541171 LSG1Q9H089 658 aaKnown RBP27.59■■■□□ 2.01
LEMD3-203ENST00000541171 PKD2L1Q9P0L9 805 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms