RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZIM3Q96PE6 472 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 RIOK1Q9BRS2 568 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 EPN3Q9H201 632 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 VCPKMTQ9H867 229 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 NHEJ1Q9H9Q4 299 aaPredicted RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 HYOU1Q9Y4L1 999 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 FAM170AA1A519 330 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 KLHL33A6NCF5 533 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 CHMP2AO43633 222 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 RPN1P04843 607 aaKnown RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 TNFRSF8P28908 595 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 LSP1P33241 339 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PAFAH1B1P43034 410 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 DNM2P50570 870 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 CDR1P51861 262 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 SLC7A5Q01650 507 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 GUCY1A3Q02108 690 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PLCB4Q15147 1175 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ZNF174Q15697 407 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TTC38Q5R3I4 469 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 CFAP58Q5T655 872 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 C8orf74Q6P047 294 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ZNF572Q7Z3I7 529 aaPredicted RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 KRT27Q7Z3Y8 459 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 CREG2Q8IUH2 290 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 IFNL3Q8IZI9 196 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 SPATA4Q8NEY3 305 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ZNF473Q8WTR7 871 aaKnown RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 HDAC7Q8WUI4 952 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 FAM84BQ96KN1 310 aaPredicted RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 TRIM47Q96LD4 638 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 NUP58Q9BVL2 599 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 RNF26Q9BY78 433 aaPredicted RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 YIPF3Q9GZM5 350 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 EHMT1Q9H9B1 1298 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 MAPK8IP1Q9UQF2 711 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 GDAQ9Y2T3 454 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TRIM49BA6NDI0 452 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 SORBS3O60504 671 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TBCAO75347 108 aaKnown RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 SLC34A2O95436 690 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 MYCLP12524 364 aaPredicted RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 TCP1P17987 556 aaKnown RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 ERCC3P19447 782 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PRCPP42785 496 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 RCAN1P53805 252 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 HAUS3Q68CZ6 603 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 FBXO33Q7Z6M2 555 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ZNF654Q8IZM8 581 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TMTC2Q8N394 836 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 RNPC3Q96LT9 517 aaKnown RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 ALS2CR12Q96Q35 445 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 THAP9Q9H5L6 903 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 C6orf50Q9HD87 102 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 KLC4Q9NSK0 619 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 SMARCAL1Q9NZC9 954 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 LRWD1Q9UFC0 647 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 L3MBTL1Q9Y468 752 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PNPLA7Q6ZV29 1317 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ATRXP46100 2492 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 SIPA1L1O43166 1804 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 GOLGA6L7A0A1B0GV03 622 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 CLRN2A0PK11 232 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TCP10L2B9ZVM9 353 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PRKAB2O43741 272 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 RAD17O75943 681 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PLCG2P16885 1265 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 NR1D1P20393 614 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 SMTNP53814 917 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ZBED6P86452 979 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ARID5AQ03989 594 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 IFT88Q13099 833 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 DRP2Q13474 957 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PTGISQ16647 500 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PREPLQ4J6C6 727 aaPredicted RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 CEP85LQ5SZL2 805 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 PDXDC2PQ6P474 469 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 FANCBQ8NB91 859 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 RETREG2Q8NC44 543 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 ZNF507Q8TCN5 953 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 EXOC1Q9NV70 894 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 HAUS2Q9NVX0 235 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 CPSF2Q9P2I0 782 aaKnown RBP5.74□□□□□ -1.49
PROM1-220ENST00000540805 NAV1Q8NEY1 1877 aa5.74□□□□□ -1.49
PROM1-220ENST00000540805 TMCO5BA8MYB1 307 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 B4DLN1 442 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 DDX39AO00148 427 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 PPP1R37O75864 691 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 POTEJP0CG39 1038 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 SRGNP10124 158 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PRLRP16471 622 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 ATP2C1P98194 919 aaPredicted RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 CYP27A1Q02318 531 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PTGDRQ13258 359 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PRPF4BQ13523 1007 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 USH1GQ495M9 461 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CRY2Q49AN0 593 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 EARS2Q5JPH6 523 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 CCDC174Q6PII3 467 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms