RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 TRIM50Q86XT4 487 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 TGS1Q96RS0 853 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 MAP3K20Q9NYL2 800 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 RTEL1Q9NZ71 1219 aa16.5■□□□□ 0.23
SEMA4D-222ENST00000540183 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 C17orf102A2RUQ5 167 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 E7EWF7 191 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 CTSHP09668 335 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 TROAPQ12815 778 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 TRDNQ13061 729 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 WTAPQ15007 396 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 MYOCDQ8IZQ8 938 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 ATP6V0A1Q93050 837 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 SUPT16HQ9Y5B9 1047 aaKnown RBP16.49■□□□□ 0.23
SEMA4D-222ENST00000540183 FRMPD4Q14CM0 1322 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 KIAA1671Q9BY89 1806 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 H3BRB1 525 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 CHMLP26374 656 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 HOXC8P31273 242 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 CYFIP1Q7L576 1253 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 TUT1Q9H6E5 874 aaKnown RBP16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 CD320Q9NPF0 282 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 SETD4Q9NVD3 440 aa16.48■□□□□ 0.23
SEMA4D-222ENST00000540183 TGFB3P10600 412 aa16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 SP4Q02446 784 aa16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 COL9A3Q14050 684 aaPredicted RBP16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 GPR20Q99678 358 aa16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
SEMA4D-222ENST00000540183 ERICH2A1L162 156 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 EFCAB14O75071 495 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 UPP2O95045 317 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 AMHP03971 560 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 HTRA4P83105 476 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 USP17L6PQ6QN14 398 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 RALYLQ86SE5 291 aaKnown RBP16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 MB21D2Q8IYB1 491 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 NCOA7Q8NI08 942 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 INPP4AQ96PE3 977 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 UBE2ZQ9H832 354 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 INSL6Q9Y581 213 aa16.46■□□□□ 0.23
SEMA4D-222ENST00000540183 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 SPATA31C2B4DYI2 1134 aa16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 NOP56O00567 594 aaKnown RBP16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 ICAM3P32942 547 aa16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 METTL7BQ6UX53 244 aa16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
SEMA4D-222ENST00000540183 C5orf42Q9H799 3197 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 GNPTABQ3T906 1256 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 LMBR1Q8WVP7 490 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 SEPT8Q92599 483 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 C1QTNF1Q9BXJ1 281 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 LY9Q9HBG7 655 aa16.44■□□□□ 0.22
SEMA4D-222ENST00000540183 MEIS2O14770 477 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 SGSM2O43147 1006 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 FIBPO43427 364 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 PLEKHA8P1O95397 391 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 IL9P15248 144 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 KCNA5P22460 613 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 ADAM17P78536 824 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 TRAF1Q13077 416 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 NEDD9Q14511 834 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 EPC2Q52LR7 807 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 ZNF654Q8IZM8 581 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 C11orf16Q9NQ32 467 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 RBM8AQ9Y5S9 174 aaKnown RBP16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 TTC3P53804 2025 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 COL4A6Q14031 1691 aa16.43■□□□□ 0.22
SEMA4D-222ENST00000540183 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 ATP9AO75110 1047 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 RXRAP19793 462 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 PLA2G5P39877 138 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 PCNX4Q63HM2 1172 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 SRBD1Q8N5C6 995 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 TOP1MTQ969P6 601 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms