RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SH3RF1Q7Z6J0 888 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 PLA2G4DQ86XP0 818 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 GPR20Q99678 358 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 SENP7Q9BQF6 1050 aa17.94■□□□□ 0.46
RPAIN-206ENST00000539417 ZMYND8Q9ULU4 1186 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-206ENST00000539417 ELP1O95163 1332 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 SCN10AQ9Y5Y9 1956 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 WNT7AO00755 349 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 ZEB2O60315 1214 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 PQBP1O60828 265 aaKnown RBP17.93■□□□□ 0.46
RPAIN-206ENST00000539417 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-206ENST00000539417 KRT2P35908 639 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 ITGA7Q13683 1181 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 NEDD9Q14511 834 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 PRR16Q569H4 304 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 C1orf53Q5VUE5 145 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 DIS3L2Q8IYB7 885 aaKnown RBP17.93■□□□□ 0.46
RPAIN-206ENST00000539417 SLC43A3Q8NBI5 491 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-206ENST00000539417 POLR3EQ9NVU0 708 aa17.93■□□□□ 0.46
RPAIN-206ENST00000539417 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-206ENST00000539417 GSTTP1A0A1W2PQM5 241 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 ARVCFO00192 962 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 DHX15O43143 795 aaKnown RBP17.92■□□□□ 0.46
RPAIN-206ENST00000539417 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 HMGN5P82970 282 aaKnown RBP17.92■□□□□ 0.46
RPAIN-206ENST00000539417 NONOQ15233 471 aaKnown RBP eCLIP17.92■□□□□ 0.46
RPAIN-206ENST00000539417 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 NIPA1Q7RTP0 329 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 KRT25Q7Z3Z0 450 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 TRIM50Q86XT4 487 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 C16orf70Q9BSU1 422 aa17.92■□□□□ 0.46
RPAIN-206ENST00000539417 DDX39AO00148 427 aaKnown RBP17.91■□□□□ 0.46
RPAIN-206ENST00000539417 CABYRO75952 493 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 GJB2P29033 226 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 USP11P51784 963 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 CUL4AQ13619 759 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 DGKDQ16760 1214 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 CDHR1Q96JP9 859 aa17.91■□□□□ 0.46
RPAIN-206ENST00000539417 CCDC194A0A1B0GVG4 234 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 TRIM43BA6NCK2 446 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 KIF28PB7ZC32 967 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 MSH4O15457 936 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 MAFGO15525 162 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 SLC37A4O43826 429 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 CCNE2O96020 404 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 LGALS2P05162 132 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 FAAP100Q0VG06 881 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 HIC1Q14526 733 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 BRDTQ58F21 947 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-206ENST00000539417 ANKRD33Q7Z3H0 272 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 FAM126BQ8IXS8 530 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 FBXO18Q8NFZ0 1043 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 TRIM43Q96BQ3 446 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-206ENST00000539417 TRPV6Q9H1D0 765 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 PDLIM7Q9NR12 457 aa17.9■□□□□ 0.46
RPAIN-206ENST00000539417 CYP3A7-CYP3A51PA0A087WV96 503 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 HAS3O00219 553 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 KPNA6O60684 536 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 PPFIA4O75335 1185 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 F2P00734 622 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 CYP3A7P24462 503 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 ITGB8P26012 769 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 TRIM29Q14134 588 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 LETM2Q2VYF4 491 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
RPAIN-206ENST00000539417 MBOAT7Q96N66 472 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 PCYT2Q99447 389 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 NFASCO94856 1347 aa17.89■□□□□ 0.45
RPAIN-206ENST00000539417 IPO5O00410 1097 aaKnown RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 NOP56O00567 594 aaKnown RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 B4GALT4O60513 344 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 CD4P01730 458 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 TCF7P36402 384 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 PSEN2P49810 448 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 MFSD10Q14728 455 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 ZNF577Q9BSK1 485 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 JPH1Q9HDC5 661 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 TRMT13Q9NUP7 481 aaKnown RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 SLC9A2Q9UBY0 812 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 ACTR2P61160 394 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 Q4G0T1 1027 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 NEK8Q86SG6 692 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 GIMAP8Q8ND71 665 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 CTAGE1Q96RT6 745 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-206ENST00000539417 HDAC6Q9UBN7 1215 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 NR2E3Q9Y5X4 410 aa17.88■□□□□ 0.45
RPAIN-206ENST00000539417 CEP290O15078 2479 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 RANBP2P49792 3224 aaKnown RBP17.87■□□□□ 0.45
RPAIN-206ENST00000539417 LTBP2Q14767 1821 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 K7ELQ4 463 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-206ENST00000539417 ZNF200P98182 395 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-206ENST00000539417 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-206ENST00000539417 FAM47CQ5HY64 1035 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms