RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MXRA8Q9BRK3 442 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 SCAND2PQ9GZW5 306 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 C11orf49Q9H6J7 331 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 HOMER2Q9NSB8 354 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PTCH2Q9Y6C5 1203 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF236Q9UL36 1845 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 FRMPD4Q14CM0 1322 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 STXBP3O00186 592 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CNMDO75829 334 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 SLC16A2P36021 539 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 GJA8P48165 433 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ARHGAP4P98171 946 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 MTMR1Q13613 665 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CUL4AQ13619 759 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 TFDP1Q14186 410 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 RRP1BQ14684 758 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ZRSR1Q15695 479 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 KYAT1Q16773 422 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 Q4G0T1 1027 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 C1orf53Q5VUE5 145 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 KRT79Q5XKE5 535 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 MCTP1Q6DN14 999 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 FCHSD1Q86WN1 690 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CAGE1Q8TC20 777 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 KCNG4Q8TDN1 519 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ABHD8Q96I13 439 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF333Q96JL9 665 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 TOX2Q96NM4 488 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 NUP88Q99567 741 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 FBXO28Q9NVF7 368 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 KCND2Q9NZV8 630 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 GJD2Q9UKL4 321 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 SQORQ9Y6N5 450 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 EMSYQ7Z589 1322 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CYP3A7-CYP3A51PA0A087WV96 503 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 A0A1W2PPC1 479 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 FSD2A1L4K1 749 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 HBP1O60381 514 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 GABBR2O75899 941 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MMP1P03956 469 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 GOLGA8HP0CJ92 632 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CYBAP13498 195 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CYP3A7P24462 503 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 RFC5P40937 340 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SETDB1Q15047 1291 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MAP3K21Q5TCX8 1036 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC181Q5TID7 509 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 NFRKBQ6P4R8 1299 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC83Q8IWF9 413 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SRBD1Q8N5C6 995 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 FBXO18Q8NFZ0 1043 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TMX3Q96JJ7 454 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 AGBL1Q96MI9 1066 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 INPP4AQ96PE3 977 aaPredicted RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MYCBPQ99417 103 aaPredicted RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ERAP1Q9NZ08 941 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 OGDHLQ9ULD0 1010 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PHF24Q9UPV7 400 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MYH8P13535 1937 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 BACH1O14867 736 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 HOXA2O43364 376 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 NMT2O60551 498 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PEX14O75381 377 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PAX3P23760 479 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 KRT85P78386 507 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 FMR1Q06787 632 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PPIGQ13427 754 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ALCAMQ13740 583 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TOB2Q14106 344 aaPredicted RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PDIA5Q14554 519 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 EPHA7Q15375 998 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 KRT40Q6A162 431 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TTBK2Q6IQ55 1244 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ELMSAN1Q6PJG2 1045 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 KRBA2Q6ZNG9 492 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PLPPR4Q7Z2D5 763 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MIER3Q7Z3K6 550 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MTERF4Q7Z6M4 381 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 DIS3L2Q8IYB7 885 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 NSUN7Q8NE18 718 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PPTC7Q8NI37 304 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 APBB2Q92870 758 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF577Q9BSK1 485 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 STARD7Q9NQZ5 370 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SLC9A2Q9UBY0 812 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 UBIAD1Q9Y5Z9 338 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ARHGEF37A1IGU5 675 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SPATA31C2B4DYI2 1134 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 RIOK3O14730 519 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 NEMFO60524 1076 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MYL1P05976 194 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 STK3Q13188 491 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PGM5Q15124 567 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 STK38Q15208 465 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CALCRLQ16602 461 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 FSCN1Q16658 493 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ADCK5Q3MIX3 580 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SLFNL1Q499Z3 407 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 DTHD1Q6ZMT9 781 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TLK2Q86UE8 772 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms