RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 CEP290O15078 2479 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 BTBD18B2RXH4 712 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 ZEB2O60315 1214 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 XBP1P17861 261 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 HOXC8P31273 242 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 RTP1P59025 263 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 NR5A1Q13285 461 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 PPP4R3AQ6IN85 833 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 KRT25Q7Z3Z0 450 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 SESTD1Q86VW0 696 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
SRRM4-202ENST00000537597 GLT1D1Q96MS3 346 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 MTG1Q9BT17 334 aaPredicted RBP17.25■□□□□ 0.35
SRRM4-202ENST00000537597 STARD7Q9NQZ5 370 aa17.25■□□□□ 0.35
SRRM4-202ENST00000537597 IGKV6D-21A0A0A0MT36 114 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 F2P00734 622 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
SRRM4-202ENST00000537597 FAAP100Q0VG06 881 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 ITGA7Q13683 1181 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 NONOQ15233 471 aaKnown RBP eCLIP17.24■□□□□ 0.35
SRRM4-202ENST00000537597 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 SPATA33Q96N06 139 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 PCYT2Q99447 389 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 PRO3102Q9H379 93 aa17.24■□□□□ 0.35
SRRM4-202ENST00000537597 DOCK5Q9H7D0 1870 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 A0A0U1RQG5 324 aaPredicted RBP17.23■□□□□ 0.35
SRRM4-202ENST00000537597 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 MSH4O15457 936 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 LGR5O75473 907 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 U2AF2P26368 475 aaKnown RBP eCLIP17.23■□□□□ 0.35
SRRM4-202ENST00000537597 TLE2Q04725 743 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 DGKDQ16760 1214 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 TRIM60Q495X7 471 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
SRRM4-202ENST00000537597 ETNPPLQ8TBG4 499 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 SLC5A5Q92911 643 aa17.23■□□□□ 0.35
SRRM4-202ENST00000537597 WNT7AO00755 349 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 CCNE2O96020 404 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 KRT2P35908 639 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 PSMC6P62333 389 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
SRRM4-202ENST00000537597 HIC1Q14526 733 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 INF2Q27J81 1249 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 NBPF20Q3BBV1 942 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 NFRKBQ6P4R8 1299 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 INTS4Q96HW7 963 aaKnown RBP17.22■□□□□ 0.35
SRRM4-202ENST00000537597 FOXP1Q9H334 677 aaPredicted RBP17.22■□□□□ 0.35
SRRM4-202ENST00000537597 MLXIPQ9HAP2 919 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
SRRM4-202ENST00000537597 TRIM43BA6NCK2 446 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 IPO5O00410 1097 aaKnown RBP17.21■□□□□ 0.35
SRRM4-202ENST00000537597 KIAA0355O15063 1070 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 EVI5O60447 810 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 PSMD10O75832 226 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 TDP2O95551 362 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
SRRM4-202ENST00000537597 MYL3P08590 195 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
SRRM4-202ENST00000537597 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.35
SRRM4-202ENST00000537597 ABHD15Q6UXT9 468 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 SEPT1Q8WYJ6 367 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 DPF3Q92784 378 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 TRIM43Q96BQ3 446 aaPredicted RBP17.21■□□□□ 0.35
SRRM4-202ENST00000537597 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 PDLIM7Q9NR12 457 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 TBX21Q9UL17 535 aa17.21■□□□□ 0.35
SRRM4-202ENST00000537597 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 H0YGN5 161 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 LGALS2P05162 132 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 ITGB8P26012 769 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 GJB2P29033 226 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 ADAM17P78536 824 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 PRR16Q569H4 304 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 SH3RF1Q7Z6J0 888 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 NEK8Q86SG6 692 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 HAS1Q92839 578 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 RIT2Q99578 217 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 TBC1D22BQ9NU19 505 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
SRRM4-202ENST00000537597 SLC37A4O43826 429 aa17.19■□□□□ 0.34
SRRM4-202ENST00000537597 ZNF76P36508 570 aa17.19■□□□□ 0.34
SRRM4-202ENST00000537597 PSEN2P49810 448 aa17.19■□□□□ 0.34
SRRM4-202ENST00000537597 ACTR2P61160 394 aa17.19■□□□□ 0.34
SRRM4-202ENST00000537597 JPH1Q9HDC5 661 aaPredicted RBP17.19■□□□□ 0.34
SRRM4-202ENST00000537597 NR2E3Q9Y5X4 410 aa17.19■□□□□ 0.34
SRRM4-202ENST00000537597 EMSYQ7Z589 1322 aa17.19■□□□□ 0.34
SRRM4-202ENST00000537597 CCDC194A0A1B0GVG4 234 aa17.18■□□□□ 0.34
SRRM4-202ENST00000537597 H3BRB1 525 aa17.18■□□□□ 0.34
SRRM4-202ENST00000537597 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
SRRM4-202ENST00000537597 TBX3O15119 743 aa17.18■□□□□ 0.34
SRRM4-202ENST00000537597 SORBS3O60504 671 aa17.18■□□□□ 0.34
SRRM4-202ENST00000537597 GCFC2P16383 781 aaKnown RBP17.18■□□□□ 0.34
SRRM4-202ENST00000537597 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
SRRM4-202ENST00000537597 GUCY1B3Q02153 619 aa17.18■□□□□ 0.34
SRRM4-202ENST00000537597 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
SRRM4-202ENST00000537597 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms