RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 RASA1P20936 1047 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 MAPK4P31152 587 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 TDO2P48775 406 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 UBXN2AP68543 259 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 CLDN10P78369 228 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 C1orf53Q5VUE5 145 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 CATSPERGQ6ZRH7 1159 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 WFDC8Q8IUA0 241 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 SIAH1Q8IUQ4 282 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 GPRC5AQ8NFJ5 357 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 LPAR1Q92633 364 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 SEC62Q99442 399 aaKnown RBP8.38□□□□□ -1.07
YBX3-206ENST00000536823 PAGR1Q9BTK6 254 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 SH2D4AQ9H788 454 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 RBPJLQ9UBG7 517 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
YBX3-206ENST00000536823 TMX2Q9Y320 296 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 SUPT16HQ9Y5B9 1047 aaKnown RBP8.38□□□□□ -1.07
YBX3-206ENST00000536823 RLFQ13129 1914 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
YBX3-206ENST00000536823 GSC2O15499 205 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 CNMDO75829 334 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 DKK1O94907 266 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 IGHDP01880 384 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 CCL5P13501 91 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 NUCB1Q02818 461 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 KIAA1755Q5JYT7 1200 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 FAM35AQ86V20 835 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 CHD1LQ86WJ1 897 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 TICAM2Q86XR7 235 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 SIX5Q8N196 739 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 SOCS4Q8WXH5 440 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 NACAP1Q9BZK3 213 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 TANGO6Q9C0B7 1094 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 PORCNQ9H237 461 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 VCPKMTQ9H867 229 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 KANSL2Q9H9L4 492 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 GJD2Q9UKL4 321 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 NOVA2Q9UNW9 492 aaKnown RBP8.37□□□□□ -1.07
YBX3-206ENST00000536823 TRIOBPQ9H2D6 2365 aa8.37□□□□□ -1.07
YBX3-206ENST00000536823 PLIN4Q96Q06 1357 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 PARP14Q460N5 1801 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 WDR46O15213 610 aaKnown RBP8.36□□□□□ -1.07
YBX3-206ENST00000536823 FOXP2O15409 715 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 IGLV1-40P01703 118 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 HMGCRP04035 888 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 APPP05067 770 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 GJB1P08034 283 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 EEF2P13639 858 aaKnown RBP8.36□□□□□ -1.07
YBX3-206ENST00000536823 CCNA1P78396 465 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 B4GALNT3Q6L9W6 998 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 CCDC129Q6ZRS4 1044 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 IFNL3Q8IZI9 196 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 PHACTR1Q9C0D0 580 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 RNF208Q9H0X6 261 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 NAPBQ9H115 298 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 ZNF287Q9HBT7 754 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 BTBD7Q9P203 1132 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
YBX3-206ENST00000536823 ZNF236Q9UL36 1845 aa8.36□□□□□ -1.07
YBX3-206ENST00000536823 RANBP2P49792 3224 aaKnown RBP8.35□□□□□ -1.07
YBX3-206ENST00000536823 MYH4Q9Y623 1939 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 IGKV6D-41A0A0C4DH26 115 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 XRCC5P13010 732 aaKnown RBP8.35□□□□□ -1.07
YBX3-206ENST00000536823 CPB1P15086 417 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 GJA8P48165 433 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 COG2Q14746 738 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 GPR142Q7Z601 462 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 PLEKHH3Q7Z736 793 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 CCAR1Q8IX12 1150 aaKnown RBP8.35□□□□□ -1.07
YBX3-206ENST00000536823 SPICE1Q8N0Z3 855 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 MB21D1Q8N884 522 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 TRIB2Q92519 343 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 USP6NLQ92738 828 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 APBA2Q99767 749 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 LPIN3Q9BQK8 851 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
YBX3-206ENST00000536823 HELLSQ9NRZ9 838 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 HOXC10Q9NYD6 342 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 NYAP2Q9P242 653 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 HCN4Q9Y3Q4 1203 aa8.35□□□□□ -1.07
YBX3-206ENST00000536823 ZMYM6O95789 1325 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 ADAMTS4O75173 837 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 DEAF1O75398 565 aaPredicted RBP8.34□□□□□ -1.07
YBX3-206ENST00000536823 PRDM1O75626 825 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 FLOT1O75955 427 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 ALX3O95076 343 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 SLC3A2P08195 630 aaKnown RBP8.34□□□□□ -1.07
YBX3-206ENST00000536823 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms