RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYL10Q9BUA6 226 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 SEC63Q9UGP8 760 aaKnown RBP12.45□□□□□ -0.42
CCDC60-202ENST00000535685 SLC12A7Q9Y666 1083 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 PLEKHA8P1O95397 391 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 PARNO95453 639 aaKnown RBP12.44□□□□□ -0.42
CCDC60-202ENST00000535685 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
CCDC60-202ENST00000535685 MYCLP12524 364 aaPredicted RBP12.44□□□□□ -0.42
CCDC60-202ENST00000535685 UBA1P22314 1058 aaKnown RBP12.44□□□□□ -0.42
CCDC60-202ENST00000535685 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
CCDC60-202ENST00000535685 SP2Q02086 613 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 GNPTABQ3T906 1256 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 PCNX4Q63HM2 1172 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 TMTC3Q6ZXV5 915 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 FCHSD1Q86WN1 690 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 CUL5Q93034 780 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 GTF2IRD1Q9UHL9 959 aa12.44□□□□□ -0.42
CCDC60-202ENST00000535685 CHD7Q9P2D1 2997 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 PRUNE2Q8WUY3 3088 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 SPATA31C2B4DYI2 1134 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
CCDC60-202ENST00000535685 GGPS1O95749 300 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 IQCF3P0C7M6 154 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 PSEN2P49810 448 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 NEDD9Q14511 834 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 RAB30Q15771 203 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 PTGISQ16647 500 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 HSDL1Q3SXM5 330 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 FAM47CQ5HY64 1035 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 GDF6Q6KF10 455 aaPredicted RBP12.43□□□□□ -0.42
CCDC60-202ENST00000535685 APOA5Q6Q788 366 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 FBXL16Q8N461 479 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 CCDC155Q8N6L0 562 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 SLC17A8Q8NDX2 589 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 DDX12PQ92771 950 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 TIFAQ96CG3 184 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 SCLYQ96I15 445 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 SPATA33Q96N06 139 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 RBM28Q9NW13 759 aaKnown RBP12.43□□□□□ -0.42
CCDC60-202ENST00000535685 CXXC1Q9P0U4 656 aaPredicted RBP12.43□□□□□ -0.42
CCDC60-202ENST00000535685 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 CDH23Q9H251 3354 aa12.43□□□□□ -0.42
CCDC60-202ENST00000535685 FIBPO43427 364 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 HOXC8P31273 242 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 FUT2Q10981 343 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 METTL7BQ6UX53 244 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 CCDC136Q96JN2 1154 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 FAM161BQ96MY7 647 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 C16orf70Q9BSU1 422 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 LRRC2Q9BYS8 371 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 PSTPIP2Q9H939 334 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
CCDC60-202ENST00000535685 TRANK1O15050 2925 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 PTPRSQ13332 1948 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 hCG_1984214I3L0E3 225 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 ACTN1P12814 892 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 RXRAP19793 462 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 HSPA4P34932 840 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 PTK7Q13308 1070 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 TRIM71Q2Q1W2 868 aaKnown RBP12.41□□□□□ -0.42
CCDC60-202ENST00000535685 ADCK5Q3MIX3 580 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 OTOP2Q7RTS6 562 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 ZNF713Q8N859 430 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-202ENST00000535685 C7orf31Q8N865 590 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-202ENST00000535685 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
CCDC60-202ENST00000535685 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
CCDC60-202ENST00000535685 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 MLXIPQ9HAP2 919 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CCDC60-202ENST00000535685 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 CNTNAP5Q8WYK1 1306 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 GRXCR1A8MXD5 290 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 MAFGO15525 162 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 ZBTB43O43298 467 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 CXCL10P02778 98 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 SELPP16109 830 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 GPNMBQ14956 572 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 GRIN2CQ14957 1233 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 NLRX1Q86UT6 975 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 MICU3Q86XE3 530 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
CCDC60-202ENST00000535685 CDHR1Q96JP9 859 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms