RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TOP2AP11388 1531 aaKnown RBP5.94□□□□□ -1.46
ITGB1-219ENST00000534049 TCRBV5S2A0A599 114 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 FOXD2O60548 495 aaPredicted RBP5.94□□□□□ -1.46
ITGB1-219ENST00000534049 APPP05067 770 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 GRK2P25098 689 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 GRK3P35626 688 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
ITGB1-219ENST00000534049 SYT8Q8NBV8 401 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 OSBP2Q969R2 916 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 NOX5Q96PH1 765 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
ITGB1-219ENST00000534049 AQP7O14520 342 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 ITGA1P56199 1179 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 KIAA2012Q0VF49 1180 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 SMAD4Q13485 552 aaKnown RBP5.93□□□□□ -1.46
ITGB1-219ENST00000534049 NT5DC1Q5TFE4 455 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 ZDHHC14Q8IZN3 488 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 PKNOX2Q96KN3 472 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 CLIC6Q96NY7 704 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 CDC6Q99741 560 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 CDIP1Q9H305 208 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 SPATA6Q9NWH7 488 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-219ENST00000534049 ASH2LQ9UBL3 628 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 MRC2Q9UBG0 1479 aa5.93□□□□□ -1.46
ITGB1-219ENST00000534049 RSF1Q96T23 1441 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-219ENST00000534049 FAM47E-STBD1D6RA91 191 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 NOBOXO60393 691 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 CELA3BP08861 270 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 GNAT1P11488 350 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 GTF2F1P35269 517 aaKnown RBP eCLIP5.92□□□□□ -1.461e-12■■■■■ 49.4
ITGB1-219ENST00000534049 SUMO1P63165 101 aaKnown RBP5.92□□□□□ -1.46
ITGB1-219ENST00000534049 SSRP1Q08945 709 aaKnown RBP5.92□□□□□ -1.46
ITGB1-219ENST00000534049 CR1LQ2VPA4 569 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 UBXN11Q5T124 520 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 BORAQ6PGQ7 559 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 OTOP3Q7RTS5 596 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 ZNF761Q86XN6 746 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-219ENST00000534049 ZBTB38Q8NAP3 1195 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-219ENST00000534049 ADAMTS17Q8TE56 1095 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 PDGFDQ9GZP0 370 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-219ENST00000534049 CADPSQ9ULU8 1353 aa5.92□□□□□ -1.46
ITGB1-219ENST00000534049 PDS5BQ9NTI5 1447 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 A0A1B0GTL3 188 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 C9orf118A6NHY6 69 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 STAT5AP42229 794 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 RBL2Q08999 1139 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 ADGRG2Q8IZP9 1017 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 FAM26EQ8N5C1 309 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 ARRDC4Q8NCT1 418 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 UHMK1Q8TAS1 419 aaKnown RBP5.91□□□□□ -1.46
ITGB1-219ENST00000534049 PTPRN2Q92932 1015 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 LNPKQ9C0E8 428 aa5.91□□□□□ -1.46
ITGB1-219ENST00000534049 CFTRP13569 1480 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 TRBV23-1A0A0A0MS06 115 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 ADCY3O60266 1144 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 MSCO60682 206 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 SOD2P04179 222 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 NTRK3Q16288 839 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 PIP4K2CQ8TBX8 421 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 MKL1Q969V6 931 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 JAM3Q9BX67 310 aa5.9□□□□□ -1.46
ITGB1-219ENST00000534049 CEP164Q9UPV0 1460 aa5.9□□□□□ -1.47
ITGB1-219ENST00000534049 GSTA4O15217 222 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 CHGBP05060 677 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 GABREP78334 506 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 PAK1Q13153 545 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 SERINC3Q13530 473 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 RGL3Q3MIN7 710 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 PRR31Q5SQ13 230 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 PRAMEF18Q5VWM3 479 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 KCNT2Q6UVM3 1135 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 SPATC1Q76KD6 591 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 PLEKHH3Q7Z736 793 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 LGI4Q8N135 537 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 BORCS6Q96GS4 357 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 LCORQ96JN0 433 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-219ENST00000534049 ADAM7Q9H2U9 754 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 FANCD2Q9BXW9 1451 aa5.89□□□□□ -1.47
ITGB1-219ENST00000534049 CCDC163A0A0D9SF12 145 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 MROH6A6NGR9 719 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 CCDC85CA6NKD9 419 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 WNT9AO14904 365 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 LRG1P02750 347 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 ZNF28P17035 718 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 ADAM9Q13443 819 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 SURF1Q15526 300 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 HABP4Q5JVS0 413 aaKnown RBP5.88□□□□□ -1.47
ITGB1-219ENST00000534049 YOD1Q5VVQ6 348 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-219ENST00000534049 VASNQ6EMK4 673 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 MTDHQ86UE4 582 aaKnown RBP5.88□□□□□ -1.47
ITGB1-219ENST00000534049 NLGN4XQ8N0W4 816 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 DEPDC7Q96QD5 511 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 L2HGDHQ9H9P8 463 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 DSEQ9UL01 958 aa5.88□□□□□ -1.47
ITGB1-219ENST00000534049 EFCAB14O75071 495 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 EPHA5P54756 1037 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 PLP2Q04941 152 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms