RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 EPHB4P54760 987 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 MFSD10Q14728 455 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 LRIT3Q3SXY7 679 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 SESTD1Q86VW0 696 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 REXO1Q8N1G1 1221 aaKnown RBP17.56■□□□□ 0.4
CPSF1-210ENST00000532935 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-210ENST00000532935 MXRA8Q9BRK3 442 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 NOC4LQ9BVI4 516 aaKnown RBP17.56■□□□□ 0.4
CPSF1-210ENST00000532935 SH3GLB2Q9NR46 395 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 UMODL1Q5DID0 1318 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 HAS3O00219 553 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 SOX1O00570 391 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-210ENST00000532935 MAFGO15525 162 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 CYP2C9P11712 490 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 NEK4P51957 841 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 PPIGQ13427 754 aaKnown RBP eCLIP17.55■□□□□ 0.46e-14■■■□□ 16.5
CPSF1-210ENST00000532935 SHHQ15465 462 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 KIAA0753Q2KHM9 967 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 MCTP2Q6DN12 878 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 TMEM199Q8N511 208 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 BICD2Q8TD16 824 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 GPR20Q99678 358 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 C16orf70Q9BSU1 422 aa17.55■□□□□ 0.4
CPSF1-210ENST00000532935 CDKL5O76039 1030 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 LGALS2P05162 132 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 CSF2RAP15509 400 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 ARHGAP4P98171 946 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 SP4Q02446 784 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 CEP55Q53EZ4 464 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
CPSF1-210ENST00000532935 C7orf31Q8N865 590 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 PKD2L1Q9P0L9 805 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 HDAC6Q9UBN7 1215 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 TELO2Q9Y4R8 837 aa17.54■□□□□ 0.4
CPSF1-210ENST00000532935 ZNF76P36508 570 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 NLRP5P59047 1200 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 PTGISQ16647 500 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 RASGRP4Q8TDF6 673 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 CRYGNQ8WXF5 182 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 LRCH3Q96II8 777 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 WNT8AQ9H1J5 351 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 KCNH7Q9NS40 1196 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 GTF2IRD1Q9UHL9 959 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 NOD1Q9Y239 953 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 WDR81Q562E7 1941 aa17.53■□□□□ 0.4
CPSF1-210ENST00000532935 STK36Q9NRP7 1315 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 H3BRB1 525 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 MEIS1O00470 390 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 SLC34A2O95436 690 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 LARGE1O95461 756 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 CYP3A4P08684 503 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 ARP10275 920 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 CCL23P55773 120 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 ME3Q16798 604 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 NIPA1Q7RTP0 329 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 FAM177A1Q8N128 213 aaPredicted RBP17.52■□□□□ 0.4
CPSF1-210ENST00000532935 AIFM3Q96NN9 605 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.4
CPSF1-210ENST00000532935 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
CPSF1-210ENST00000532935 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 CTDNEP1O95476 244 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 FAM86B2P0C5J1 330 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 UTP14CQ5TAP6 766 aaKnown RBP17.51■□□□□ 0.39
CPSF1-210ENST00000532935 C16orf59Q7L2K0 433 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 NECAB1Q8N987 351 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.51■□□□□ 0.393e-13■□□□□ 10.2
CPSF1-210ENST00000532935 AGO4Q9HCK5 861 aaKnown RBP17.51■□□□□ 0.39
CPSF1-210ENST00000532935 JPH1Q9HDC5 661 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-210ENST00000532935 IL23AQ9NPF7 189 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 PCDHA4Q9UN74 947 aa17.51■□□□□ 0.39
CPSF1-210ENST00000532935 NFASCO94856 1347 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 MYH9P35579 1960 aaKnown RBP17.5■□□□□ 0.39
CPSF1-210ENST00000532935 GSTTP1A0A1W2PQM5 241 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 ACRP10323 421 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 TCF7P36402 384 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-210ENST00000532935 ITGB3BPQ13352 177 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-210ENST00000532935 BFSP2Q13515 415 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 TMEM240Q5SV17 173 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 PLA2G4DQ86XP0 818 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 SEPT1Q8WYJ6 367 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 SCLYQ96I15 445 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 RNPC3Q96LT9 517 aaKnown RBP17.5■□□□□ 0.39
CPSF1-210ENST00000532935 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 ZNF215Q9UL58 517 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-210ENST00000532935 TET1Q8NFU7 2136 aa17.5■□□□□ 0.39
CPSF1-210ENST00000532935 IGLV3-22A0A075B6J6 115 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 DTNBO60941 627 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-210ENST00000532935 HIC1Q14526 733 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 PSRC1Q6PGN9 363 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-210ENST00000532935 BLIDQ8IZY5 108 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms