RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 SNX14Q9Y5W7 946 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 PRUNE2Q8WUY3 3088 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 ZBTB43O43298 467 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 NBNO60934 754 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 SELPP16109 830 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 PTK7Q13308 1070 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 NEDD9Q14511 834 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 MBTPS1Q14703 1052 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 RTN1Q16799 776 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 LRRC8DQ7L1W4 858 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 TRIM50Q86XT4 487 aa21.77■■□□□ 1.08
SSH3-209ENST00000532600 RBM28Q9NW13 759 aaKnown RBP21.77■■□□□ 1.08
SSH3-209ENST00000532600 KLF18A0A0U1RQI7 1052 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 H3BRB1 525 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 KCNA2P16389 499 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 ATP2A2P16615 1042 aaKnown RBP21.76■■□□□ 1.07
SSH3-209ENST00000532600 KRT32Q14532 448 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 SYNE3Q6ZMZ3 975 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 USP38Q8NB14 1042 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 SENP7Q9BQF6 1050 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 PRDM12Q9H4Q4 367 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 TUT1Q9H6E5 874 aaKnown RBP21.76■■□□□ 1.07
SSH3-209ENST00000532600 MSRAQ9UJ68 235 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 PCDHA6Q9UN73 950 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 PCDHA8Q9Y5H6 950 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 UBIAD1Q9Y5Z9 338 aa21.76■■□□□ 1.07
SSH3-209ENST00000532600 GOLGA8AA7E2F4 631 aa21.75■■□□□ 1.07
SSH3-209ENST00000532600 GOLGA8BA8MQT2 603 aa21.75■■□□□ 1.07
SSH3-209ENST00000532600 CXCL10P02778 98 aa21.75■■□□□ 1.07
SSH3-209ENST00000532600 ADGRE1Q14246 886 aa21.75■■□□□ 1.07
SSH3-209ENST00000532600 ZNF618Q5T7W0 954 aa21.75■■□□□ 1.07
SSH3-209ENST00000532600 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.75■■□□□ 1.07
SSH3-209ENST00000532600 CCDC155Q8N6L0 562 aa21.75■■□□□ 1.07
SSH3-209ENST00000532600 FTOQ9C0B1 505 aaKnown RBP eCLIP21.75■■□□□ 1.07
SSH3-209ENST00000532600 V9GY48 417 aaPredicted RBP21.75■■□□□ 1.07
SSH3-209ENST00000532600 STXBP3O00186 592 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 ARHGEF15O94989 841 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 SMIM10L2AP0DMW4 78 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 SMIM10L2BP0DMW5 78 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 APOBRQ0VD83 1088 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 C8orf34Q49A92 452 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 SERINC5Q86VE9 423 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 GPRASP2Q96D09 838 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 JAKMIP1Q96N16 626 aaKnown RBP21.74■■□□□ 1.07
SSH3-209ENST00000532600 RNPEPQ9H4A4 650 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 PCDHA11Q9Y5I1 949 aa21.74■■□□□ 1.07
SSH3-209ENST00000532600 NOP56O00567 594 aaKnown RBP21.73■■□□□ 1.07
SSH3-209ENST00000532600 ADAMTS3O15072 1205 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 SEC24BO95487 1268 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 HMGB1P09429 215 aaKnown RBP21.73■■□□□ 1.07
SSH3-209ENST00000532600 ACTN1P12814 892 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 ADD1P35611 737 aaKnown RBP21.73■■□□□ 1.07
SSH3-209ENST00000532600 RCAN1P53805 252 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 SP4Q02446 784 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 Q6ZUG5 572 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 NLRX1Q86UT6 975 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 PGBD1Q96JS3 809 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 USP26Q9BXU7 913 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 OSBPL7Q9BZF2 842 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 RIC8AQ9NPQ8 531 aa21.73■■□□□ 1.07
SSH3-209ENST00000532600 CUL9Q8IWT3 2517 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 C17orf102A2RUQ5 167 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 DLL1O00548 723 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 TREHO43280 583 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 TMCO2Q7Z6W1 182 aaPredicted RBP21.72■■□□□ 1.07
SSH3-209ENST00000532600 CYP2W1Q8TAV3 490 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 SLC9A7Q96T83 725 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 SLC28A3Q9HAS3 691 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 MYO9BQ13459 2157 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 NID2Q14112 1375 aa21.72■■□□□ 1.07
SSH3-209ENST00000532600 GSTTP1A0A1W2PQM5 241 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 SPDYE3A6NKU9 549 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 BAIAP3O94812 1187 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 NAPAP54920 295 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 ADAM17P78536 824 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
SSH3-209ENST00000532600 PPP1R18Q6NYC8 613 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 HERC6Q8IVU3 1022 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 PHOSPHO2Q8TCD6 241 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 BRF1Q92994 677 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 ATP6V0A1Q93050 837 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 AGXT2Q9BYV1 514 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 JADE2Q9NQC1 790 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 SETD4Q9NVD3 440 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 TMEM260Q9NX78 707 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 BARHL2Q9NY43 387 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 PKD2L1Q9P0L9 805 aa21.71■■□□□ 1.07
SSH3-209ENST00000532600 REC8O95072 547 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 CA3P07451 260 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 RPS6KB1P23443 525 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 CLK2P49760 499 aaKnown RBP21.7■■□□□ 1.06
SSH3-209ENST00000532600 WDR5P61964 334 aaKnown RBP21.7■■□□□ 1.06
SSH3-209ENST00000532600 DEFB103AP81534 67 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 MTMR1Q13613 665 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 PPP2R2DQ66LE6 453 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 TRANK1O15050 2925 aa21.7■■□□□ 1.06
SSH3-209ENST00000532600 TCF7P36402 384 aaPredicted RBP21.69■■□□□ 1.06
SSH3-209ENST00000532600 THPOP40225 353 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 METAP2P50579 478 aaKnown RBP eCLIP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms